Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1307 ATGACACTTGCCAAGCCTCTTGCTGGAGGCTTACCTATCGGTGCTGTTCTAGTCACCGAACGAGTTGCTTCTGCCATAAACTTCGGTGACCATGGAAGCACTTTTTCCGGCAGCCCCCTTATCTGCAACGCTGCTCTTGCTGTCCTTGAAAAATTCTCAGAACCCAGCTTCTTAGCTAGCGCCGCCAAGAAGGGCCAACACTTGAAGCAAATTTTAACCCAAAAGTTGGGACATAACCCACATGTGAAAGAAGTACGTGGGCTTGGGCTCATTGTTGGGATTGAGCTTGACGTCTAG 297 0.4949 MTLAKPLAGGLPIGAVLVTERVASAINFGDHGSTFSGSPLICNAALAVLEKFSEPSFLASAAKKGQHLKQILTQKLGHNPHVKEVRGLGLIVGIELDV* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1307 98 Gene3D - 1 51 IPR015421 GO:0003824
Vvi19g1307 98 PANTHER AMINOTRANSFERASE CLASS III 1 98 - -
Vvi19g1307 98 Pfam Aminotransferase class-III 1 96 IPR005814 GO:0008483|GO:0030170
Vvi19g1307 98 Gene3D Aspartate Aminotransferase, domain 1 52 98 IPR015422 GO:0003824
Vvi19g1307 98 SUPERFAMILY PLP-dependent transferases 1 97 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1307 Vvi-Chr19 21974495 21974791 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1307 K00818 - vri:117909262 186.037