Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1274 ATGTGGCCTAATAAAGCAATATTACTGGTTATATTTTGGACACATCTCAATGCCATCAATGGCTTCTCCTTTTTCATTCCTTTCTCCTCTTCTTCTGCTCAGAAGATTCAGACTCATAAGTGGAGGCAACCGGTAGTCTCGGTTCTGGAGCTTGGTGGAGTCAAGATTGGCAGAGATGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTGTCGAAACTTGGAATGCAGCTTCACAGGAGGGATCAACACCCAATTGGAATTCTGAAGAATGCAATATATGATTATTTCGATGCCAATTACTCTAACAAATTTGATAAGTTGGATGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCCTGATCACATCAGTAGGAGTTACAATGATACATACTACATTGACTCTCAAACTGTCTTGAGGTGCCACACTAGTGCTCATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCGTGTTTTTCATTAG 576 0.4149 MWPNKAILLVIFWTHLNAINGFSFFIPFSSSSAQKIQTHKWRQPVVSVLELGGVKIGRDDVVRDDPTNNVPDAILSKLGMQLHRRDQHPIGILKNAIYDYFDANYSNKFDKLDDLCPIVSTKENFDDVLVPPDHISRSYNDTYYIDSQTVLRCHTSAHQAELLRRGHTHFLVTGDVYRRDSIDSTHYRVFH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1274 191 Pfam tRNA synthetases class II core domain (F) 84 191 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Vvi19g1274 191 FunFam Phenylalanine--tRNA ligase chloroplastic/mitochondrial 53 191 - -
Vvi19g1274 191 Gene3D Bira Bifunctional Protein; Domain 2 53 191 IPR045864 -
Vvi19g1274 191 PANTHER PHENYLALANYL-TRNA SYNTHETASE 48 191 - -
Vvi19g1274 191 SUPERFAMILY Class II aaRS and biotin synthetases 77 191 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1274 Vvi-Chr19 21410608 21416111 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1274 K01889 - vvi:104877750 388.652