Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1270 ATGGAATTGGAGATACGACAAACTCCAATGGGAACCTTGAAGTGTATATTTGTAGATCAAAGCTTCGCGACCATTACTGTTAGTAATGAACTAAGCTTCAATTTTGATCTATCTTCAACAATAGGAATTGATTTATCCAAAAATTTGCTACATAGAGAGATACCGACAGGATTTTCTGGGCTGTTGGGTTTGGAATACCTGAATTTATCATATAATTATCTTGATAGTCAGCTTCTTACCTTGGAAAAGACGGAGAGATTGATGGTACTGGACCTATCAGACAAATCTTTGTCAGGTCAGATCCTAGAAAATGTTTCCAATCCAAGAAACGTAAAGAATCAAGATATGTCAAGTGGAGGTTCAAAATACGGAGGATAA 378 0.3624 MELEIRQTPMGTLKCIFVDQSFATITVSNELSFNFDLSSTIGIDLSKNLLHREIPTGFSGLLGLEYLNLSYNYLDSQLLTLEKTERLMVLDLSDKSLSGQILENVSNPRNVKNQDMSSGGSKYGG* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1270 125 Gene3D Ribonuclease Inhibitor 4 121 IPR032675 -
Vvi19g1270 125 MobiDBLite consensus disorder prediction 104 125 - -
Vvi19g1270 125 SUPERFAMILY L domain-like 21 112 - -
Vvi19g1270 125 PANTHER UNNAMED PRODUCT 31 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1270 Vvi-Chr19 21354653 21355030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1270 43 101 Receptor kinase-like Gene Family AT4G08850 47.619 1.09e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1270 - - vvi:100251384 123.635