Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1190 ATGAAAGAGATTAACAGGGACGAAGGCCAAGAGATCACTTGTGTTGTTGTTGATGTGTGTCTAGGATGGGCCCTGGAAGTTGCAGCTAAGATGGGAATTAGAAGAGCTGCTTTCTGTTCAGATGCAGCAATGACTTTTGCTCAGGGACTTAGCATCAAAAAGCTGATTGATCAGGGAATAGTAGACAAGGATGGTGAGGCCTATCTGTCACTGATCCCTTTAGCATTTTTGTGGGGCATTCACTGGTGA 249 0.4498 MKEINRDEGQEITCVVVDVCLGWALEVAAKMGIRRAAFCSDAAMTFAQGLSIKKLIDQGIVDKDGEAYLSLIPLAFLWGIHW* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1190 82 Gene3D Glycogen Phosphorylase B; 1 76 - -
Vvi19g1190 82 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1190 Vvi-Chr19 19597761 19598009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1190 9 65 Glycosyltransferase AT3G02100 61.404 9.98e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1190 - - lja:Lj2g3v1079630.1 80.4925