Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1184 ATGCATGAAGAAGAACACAGGGAAGCCATACTGGTAGGGAGCTCAAAAAGGAGATACATGATAAGTTCTAAGTACTTAAACCACCCTCTCTTGAACGCCCTCATTGATAAATCAAAGCAAAGGCCCGGAGAGGCTTTACTGGTGAAGTGTGAGGTGGTTCTCTTTGATCATCTCTTGTGGATGCTTGACAATGGTGATCCAAACCTCAGTTCTGAGTCCTTAGAAGAACTGGCCGAGCTCTACGCGCTCTGA 252 0.4603 MHEEEHREAILVGSSKRRYMISSKYLNHPLLNALIDKSKQRPGEALLVKCEVVLFDHLLWMLDNGDPNLSSESLEELAELYAL* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1184 83 PANTHER EXPRESSED PROTEIN 6 82 - -
Vvi19g1184 83 Pfam Auxin responsive protein 9 62 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1184 Vvi-Chr19 19498632 19498883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1184 9 64 Calmodulin-binding Proteins AT3G43120 35.000 4.65e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1184 - - vvi:100256141 142.51