Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1149 ATGTATTCTTTACTGTTTGTAACTTTACTTGAGAAGTTGAAGGCCCTATACTCGAACTTGGAAGGCCTTCCTCCTGATCGAATTATTCCAACTGTGGGACTCAATATTGATCGTGTTGAATTGTCAAATACAAAACTTGTGTTCTGGGACCTGGGAGGTCAGTCCGGTCTTCATTCAATTTGGGAGAAATATTATGAAGAGGCACATGCTGTGGTATATGTAATTGACGCTTCTTGCCCATCATGTTTTGAAGATTCAAAATCAGCACTGGAAAAAATTCTCCGGCATGAGGATTTGCAAGGAGCTCCTCTTTTAATATTAGCAAACAAGCAGTGTATCCAAATCCTTCAAGTCCTAGTCCAGGATGCTTCCTCCCAACATCGACGGCCCAAGTGA 396 0.4167 MYSLLFVTLLEKLKALYSNLEGLPPDRIIPTVGLNIDRVELSNTKLVFWDLGGQSGLHSIWEKYYEEAHAVVYVIDASCPSCFEDSKSALEKILRHEDLQGAPLLILANKQCIQILQVLVQDASSQHRRPK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1149 131 Pfam ADP-ribosylation factor family 26 113 IPR006689 GO:0003924|GO:0005525
Vvi19g1149 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 111 IPR027417 -
Vvi19g1149 131 Gene3D - 7 125 IPR027417 -
Vvi19g1149 131 ProSiteProfiles small GTPase Arf family profile. 1 131 - -
Vvi19g1149 131 PANTHER ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1 8 113 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1149 Vvi-Chr19 18583383 18595449 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1149 K07952 - vvi:100243509 199.519