Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1148 ATGTTCCTTAAACCATTGCACTTGTCTCTGGAAACTTTATTAATACTTACTAATATATATGATTTGAATTGTCAAATACAAAACTTGTGTTCTGGGACCTGGGAGGTCAGCACTGCATTCTTGTACAACATAATAGTGCTTTGGTATTTTACTGTAGGCAGACTTCCCAAAAATCTTGAGTCCGGTCTTCATTCAATTTGGGAGAAATATTATGAAGAGGCACATGCTGTGGTATATGTAATTGACGCTTCTTGCCCATCATGTTTTGAAGATTCAAAATCAGCACTGGAAAAAATTCTCCGGCATGAGGATTTGCAAGGAGCTCCTCTTTTAATATTAGCAAACAAGCAGGTGAAATAA 360 0.3667 MFLKPLHLSLETLLILTNIYDLNCQIQNLCSGTWEVSTAFLYNIIVLWYFTVGRLPKNLESGLHSIWEKYYEEAHAVVYVIDASCPSCFEDSKSALEKILRHEDLQGAPLLILANKQVK* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1148 119 Pfam ADP-ribosylation factor family 63 117 IPR006689 GO:0003924|GO:0005525
Vvi19g1148 119 Gene3D - 55 119 IPR027417 -
Vvi19g1148 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 117 IPR027417 -
Vvi19g1148 119 PANTHER ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1 60 117 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1148 Vvi-Chr19 18550102 18552220 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1148 K07952 - vvi:104877785 120.938