Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1140 ATGCCAATGGTAAAGAGATCTGCTGCATCAAATCTGGGAAAGTTTGCTGCTACTGTTGAAGCTGCTCATTCAAAGGCTGACATCATGTCAATATTTGAGGATCTGACACAGGATGATCAAGATTCTGTTAGGTTATTGGCTGTTAAGGGTTGTGCAGCTCTCGGAAAATTGTTGGAACCTCAAGATTGTGTAGCACATATTCCTCCCATAAATTATGAATTTCTCTCAGGATAA 234 0.4017 MPMVKRSAASNLGKFAATVEAAHSKADIMSIFEDLTQDDQDSVRLLAVKGCAALGKLLEPQDCVAHIPPINYEFLSG* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1140 77 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 70 - -
Vvi19g1140 77 SUPERFAMILY ARM repeat 2 62 IPR016024 -
Vvi19g1140 77 Gene3D - 1 76 IPR011989 -
Vvi19g1140 77 ProSiteProfiles HEAT repeat profile. 28 66 IPR021133 -
Vvi19g1140 77 FunFam Uncharacterized protein 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1140 Vvi-Chr19 18256671 18256904 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1140 K03456 - vvi:100266203 131.724