Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1052 ATGATCATTAAAAAACAGGAACTAGAAAAAAGCATGGACACATTGAAGAGTCATCTTCCTATTTCTGGACCAGAGGGACTTCATGAGCTAAGGAAAATTGTTGAAAGGTTTGAGGAAAAGATTTATTCTACTGCCACAAGCCAGATGTTGACAATGGAAACAAAATCTTTTAATGCTACAACCAATTCTCTGCCATCCAACTCTGCTGGTCACAACAAAAAATCCCCTAATGACAAGAAATCCCCTACTAGGAAAAAGGCCCTCAGATCCAAGTAA 276 0.3841 MIIKKQELEKSMDTLKSHLPISGPEGLHELRKIVERFEEKIYSTATSQMLTMETKSFNATTNSLPSNSAGHNKKSPNDKKSPTRKKALRSK* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1052 91 MobiDBLite consensus disorder prediction 53 91 - -
Vvi19g1052 91 Gene3D Coactivator CBP, KIX domain 4 65 IPR036529 GO:0003712|GO:0006355
Vvi19g1052 91 MobiDBLite consensus disorder prediction 53 72 - -
Vvi19g1052 91 FunFam Uncharacterized protein 9 55 - -
Vvi19g1052 91 Pfam KIX domain 9 60 IPR036546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1052 Vvi-Chr19 15309356 15310164 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1052 K14972 - vvi:104882203 153.68