Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0955 ATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCGTTAACAAAAGAGAGAAGGCAATGAAGGTTGGCGAAACTACTAATAGTGACTTATTAGGTATGCTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTAGAATCAGTGTCACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAATAGCAATGCTTCCTAGAGTTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAACTGGATTGCAGGTCGTGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGGGATGATGCAAAGGAGTTTAATCCAAAGAGGTTTGTAGAAGGAGTTTTAAAGGTAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTATAA 495 0.3758 MKQISKEVYALLRGIVNKREKAMKVGETTNSDLLGMLMESNFREIQEHQNNKKIRISVTMIFHEVLRLYPPIAMLPRVVYKDTQVGDMCFPTGLQVVLPTILVHHDHEIWGDDAKEFNPKRFVEGVLKVTKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMIL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0955 164 Gene3D Cytochrome P450 56 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 Pfam Cytochrome P450 59 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 44 - -
Vvi19g0955 164 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Vvi19g0955 164 PRINTS E-class P450 group IV signature 130 146 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PRINTS E-class P450 group IV signature 105 123 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PRINTS E-class P450 group IV signature 55 71 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 PRINTS E-class P450 group IV signature 146 164 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0955 164 SUPERFAMILY Cytochrome P450 2 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0955 Vvi-Chr19 12089529 12090624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0955 1 164 Cytochrome P450 AT3G14610 45.946 1.08e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0955 - - vvi:100265207 266.159