Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0953 ATGAGTGTCAAAGAGGTCATTGAAGAGTGTAAGATATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTTCTTGTATGGACAATGGTCCTGCTAAGCGAGAATCCAAATTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACTGGAAGCTAATGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAGTAGCAATGCTTACTAGAGCTGTTTATAAGGACACTCAAGTGGGAGACATGTATTTTCCAGCTGGAGTGCAGGTTGCGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGAGATGATGTAAAGGAGTTTAACCCAGAGAGGCTTGCAGAAGGAATTTCGAAGGCAAAAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCAGGCATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTACAACACTTCTTATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTCAATATCCTAACTATGCAACTCCAATATGGTGGACACCTGATTCTACATGGACTTCAGTGTTGA 627 0.4051 MSVKEVIEECKIFYLAGQETTSVFLVWTMVLLSENPNWQARAREEVLQVFGNKKLEANGLNHLKIVTMIFHEVLRLYPPVAMLTRAVYKDTQVGDMYFPAGVQVALPTILVHHDHEIWGDDVKEFNPERLAEGISKAKKNQVSFFPFGWGPQACIGQNFAMMEAKIALAMILQHFLFELSPSYAHAPFNILTMQLQYGGHLILHGLQC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0953 208 Pfam Cytochrome P450 1 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 193 - -
Vvi19g0953 208 SUPERFAMILY Cytochrome P450 1 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 Gene3D Cytochrome P450 1 205 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS E-class P450 group I signature 67 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0953 208 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0953 Vvi-Chr19 11929907 11930944 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0953 1 206 Cytochrome P450 AT3G14680 64.078 7.74e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0953 - - vvi:100265207 385.571