Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0950 ATGGAGTGGAAAACACCAAGAGCCCAAAAGACTCTCCAATGGATCTTCTTTAAATTCTTCTCAAGATTCAGGGGTTCAACTTTTCTTAACGTTGTTGCTCTTGGAAATGTCGGTGCTGGTAAATCTGCAATTTTGAACAATTTGATTGGACATCTTGTTTTGCCTATTGGAGAAAATGGTGCTACTCGGGCTCTAATATGTATTGATTTACAAAAGGATTGTTTCCTAAGCAGCAAGTCGATCATCTTACAAATTGCCAACAAATCTCAACAAGTTTCTACAAGTGCTCTTCGACATTCTCTCCAGGACAAGCTGAGTAAGGGTGCTTCAGGCAAGAACCGAGATGAAATATATTTGAAGCTACGAACTAGTACAACACCTCCTCTGAAACTGGTTGATTTGCCTGGATTGGATCAACGGATTATGGATGAGACATTGGTGAGTGACTATGCTCAGCACAATGATGCCATTTTGCTGGTTATTGTACCTACTGCCCAGGCACCTGAAATGGCTTCATCTCGAGCTCTCAAAATTGCTAAGGAATATGATGGAGATGGTACAAGAAAAATCGATGTAATTAGTAAAATAGATCAAGCTGCATCATACCAGAAAATCCTTGCTGCTGTTCAGGCTCTCTTGTTAAATCAGGGTCCTCGAAGTACATCTGAAATGCCATGGGTTGCTTTAATTGGGCAATCTGTTTCAATTGCCTCTGTCTGGATCTATTGGGTCTGCATGAGTTTGATAGCGTGCCTAAAAGAATGTCTATTGTCATCAAATTCCCCAACGATACTGTGA 798 0.4073 MEWKTPRAQKTLQWIFFKFFSRFRGSTFLNVVALGNVGAGKSAILNNLIGHLVLPIGENGATRALICIDLQKDCFLSSKSIILQIANKSQQVSTSALRHSLQDKLSKGASGKNRDEIYLKLRTSTTPPLKLVDLPGLDQRIMDETLVSDYAQHNDAILLVIVPTAQAPEMASSRALKIAKEYDGDGTRKIDVISKIDQAASYQKILAAVQALLLNQGPRSTSEMPWVALIGQSVSIASVWIYWVCMSLIACLKECLLSSNSPTIL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0950 265 SMART dynamin_3 9 224 IPR001401 GO:0003924|GO:0005525
Vvi19g0950 265 FunFam Predicted protein 24 257 - -
Vvi19g0950 265 Pfam Dynamin family 31 195 IPR045063 -
Vvi19g0950 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 217 IPR027417 -
Vvi19g0950 265 PRINTS Dynamin signature 53 70 IPR022812 -
Vvi19g0950 265 PRINTS Dynamin signature 165 183 IPR022812 -
Vvi19g0950 265 PRINTS Dynamin signature 28 46 IPR022812 -
Vvi19g0950 265 PRINTS Dynamin signature 184 200 IPR022812 -
Vvi19g0950 265 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 25 265 IPR030381 GO:0005525
Vvi19g0950 265 Gene3D - 23 237 IPR027417 -
Vvi19g0950 265 PANTHER DYNAMIN 30 231 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0950 Vvi-Chr19 11837502 11838712 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0950 K01528 - vvi:100255051 372.474