Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0943 ATGCCCCGAGAGCCTTCAGTGAATCTGAGAAATGAAAAAAAAGATAAACCGAAAATGGCATTTATAAAGGAACATGAAAAATTGATAAAAGAAAGGGAGAAATGGATGAAAGGCACAGCAAAATGTTACACATTAGCAGCAGCGCTTATTGCTACTGTAGTGTTTGCAGCAGCAATTACCATCCCGGGTGGCAACCATGATGATACTGGCATACCAAATTTCACCAAAGAAAAGGCCTTCAAAGTTTTTGCAGCTTCCGATGCTCTTTCCCTCTTACTATCCATTGCTTCGGTGCTGATATGCCTATCCATTCTCACGGCACGATATGCAGAAGATGATTTTCTTTTTGCCCTTCCCAGGAGTTTCCCTTCCTTGTGGAATTGA 384 0.4167 MPREPSVNLRNEKKDKPKMAFIKEHEKLIKEREKWMKGTAKCYTLAAALIATVVFAAAITIPGGNHDDTGIPNFTKEKAFKVFAASDALSLLLSIASVLICLSILTARYAEDDFLFALPRSFPSLWN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0943 127 Pfam Domain of unknown function 33 111 IPR026961 -
Vvi19g0943 127 PANTHER CASKIN 8 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0943 Vvi-Chr19 11667992 11668535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0943 44 105 Miscellaneous Gene Families AT3G09550 38.710 4.86e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0943 - - vvi:100248044 177.178