Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0929 ATGTTGTCATTGGATAGGTATTTGTTTTCATTTGTGCTGCTTGTGTTTCTTGTTCGTTTGTGTGATGGGGGTCCTGGGGTTGTCGAAAAGAAAGTGGATTTAAAGATCATCAATGGCCTTGACGCTGGCACAGATCTTAATGTCCACTGTAAATCCAAAAACGATGACCTTGGCGCTCATGTCCTGGCCTTTGATCAATTCTTTGAATTCCGTTTCCGACCAAACTTCTGGGGGACTACCTTATACTTCTGTAGGTTCTGGTGGAACAGTGAATCCCATTGGTTTGACATATACGTTCAGAAGAGGGATGCAGGCCGATGTAACAAGAAGTGCTGGTGGTATGTGGGAGCCGATGGTCCTTGCTTACTGAATGATAAAATTGGAGTATACGATATTTGCGAAAACTGGAAGGATGGCGGTTCAAGTCAAGAAGGGACTGGAAACGACACAGCTAGAATCTACAATGAAATATTTGGAGGGCAGTGA 486 0.4383 MLSLDRYLFSFVLLVFLVRLCDGGPGVVEKKVDLKIINGLDAGTDLNVHCKSKNDDLGAHVLAFDQFFEFRFRPNFWGTTLYFCRFWWNSESHWFDIYVQKRDAGRCNKKCWWYVGADGPCLLNDKIGVYDICENWKDGGSSQEGTGNDTARIYNEIFGGQ* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0929 161 Pfam Plant self-incompatibility protein S1 34 136 IPR010264 -
Vvi19g0929 161 PANTHER - 28 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0929 Vvi-Chr19 11155237 11155722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0929 26 136 Carbohydrate Esterase AT3G16970 42.105 1.61e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0929 - - vvi:104877683 348.591