Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0926 ATGAAAGAAACTAAGCATCAATTCACTCCCGCAAAGAAGATTACAATCATGTTTCCATCCAGCAGATGTTTATTTTCAGTTGTGCTGCTTGTGTTTCTTGTTCGTTTGTGTGATGGTGTGTTTATAGAAAAGAAAGTGGATCTAAGGATCACCAATGACTTGGGCAATGGCTTGGATCTAAACCTCCACTGTAAATCCCAGGATGATGACCTTGGGGTTCATGTCCTTGCCTCTCATCAATTCTTTGAATTCAGTTTCCGACCAAACTTTTGGTCTTCTACGTTATACTTCTGTAGGTTCTGGTGGAGAGGCGAGTCCCATTGGTTTGACATATACGTTCAGAACAGGGATGTTGGACGATGCAGCAAGAAGTGCTGGTGGATGATAGATCCAACTGGTCCTTGTTTACTGAATGATAAAGTTAAAAGATACACTTATTGCGAAAACTGGAATGACCAACAGATTCAGGGTTCAAGCCAAATAGGGACAGGAAACAGCACAGCTAGAATGTCCAATGACCCTGAATATTTGGAAGGCAATGAGAAAAGAGGGAAATGA 558 0.414 MKETKHQFTPAKKITIMFPSSRCLFSVVLLVFLVRLCDGVFIEKKVDLRITNDLGNGLDLNLHCKSQDDDLGVHVLASHQFFEFSFRPNFWSSTLYFCRFWWRGESHWFDIYVQNRDVGRCSKKCWWMIDPTGPCLLNDKVKRYTYCENWNDQQIQGSSQIGTGNSTARMSNDPEYLEGNEKRGK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0926 185 PANTHER - 41 143 IPR010264 -
Vvi19g0926 185 MobiDBLite consensus disorder prediction 158 185 - -
Vvi19g0926 185 Pfam Plant self-incompatibility protein S1 48 150 IPR010264 -
Vvi19g0926 185 MobiDBLite consensus disorder prediction 158 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0926 Vvi-Chr19 11030365 11030922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0926 41 155 Carbohydrate Esterase AT3G16970 41.525 1.75e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0926 - - vvi:104877644 334.724