Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0913 ATGGCTGCCTTAGCAACTGCTGAAGTTTGTGATTCAAATGCAGCACATCTGACGAGCGGTGATTTGCGTGTTTTGCAACCAATCTTCCAGAGTTATGGGCAGTGTCGAGCTTTCTCAGGCCCCATTGTCACACTTAAGGTATTTGAGGACAATGTGTTGGTAAGGGCGCTTCTTGAAACCAGAGGTGAAGGAAGAGTCCTAGTTATAGATGGTGGAGGAAGCATGAGATGTGCCTTGGTGGGAGGGAATATAGGACAGTTGGCACAAAATATGGGATGGGCTGGAATTGTGGTGAATGGCTGCATTAGAGATGTAGATGAGATTAAGGATTGTGATATTGGAGTTAGAGCCTTGGGGGCTCATCCCATGAAATCAAACAAAAAAGGCATCGGTGAGAAGCATGTCCCTGTTTACATAGCAGGTGCCTTAATTCGTGATGGGGAATGGTTATACGCAGACAGCGACGGTATTCTAGTCTCAAAATTTGAGCTCTCTCTTTGA 501 0.4571 MAALATAEVCDSNAAHLTSGDLRVLQPIFQSYGQCRAFSGPIVTLKVFEDNVLVRALLETRGEGRVLVIDGGGSMRCALVGGNIGQLAQNMGWAGIVVNGCIRDVDEIKDCDIGVRALGAHPMKSNKKGIGEKHVPVYIAGALIRDGEWLYADSDGILVSKFELSL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0913 166 SUPERFAMILY RraA-like 4 164 IPR036704 -
Vvi19g0913 166 Gene3D - 1 166 - -
Vvi19g0913 166 PANTHER 4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED 1 164 - -
Vvi19g0913 166 Pfam Aldolase/RraA 6 159 IPR005493 -
Vvi19g0913 166 CDD RraA_family 7 160 IPR005493 -
Vvi19g0913 166 NCBIfam RraA family 6 160 IPR010203 GO:0008428|GO:0051252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0913 Vvi-Chr19 10693213 10693713 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0913 - - vvi:100256628 334.724