Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0905 ATGTTATCCGTTGAAAACCCTCCACCAGATCCCCCATGTCCTTGCGAAATTTCCCAACTGAAAGGTAGTGATGAGAGGGCTTCTGATAAACTTGCCTTGCCAGAGGTAGATCTGTTCAACTCAGGCCTTGATGATACCCAGCTACCCAAATTCTCCATAAGAGATTATGTTTTTGGTACCCGGGGCAAGGATATCAAGAAGAATTGGCCTTTTTCTCAGAAAAATTTGCAACTTTGCTTGAAGCATGGCGTGAAGGATGTGTTGCCACCATTTCAGTCTCTTGATTCAGTAAGGGAGGGGTCCTTCAAAGGATGTGTGGCCGAGACTTGTCTGCCTGACAAGGAGAATATCTGCAATTTGGATAGTTTCAGGAACTTGAATGGGGAGCCTTCTGGGTGGGTGCCTAGCTCTTCGGATAGTGCTCAACCGAACCTGAGGATAGCTGCAGACTGCATAGACATAAATTCATCTGGATCTGGAGGAGAAAAAGATTTTCCTTCATCCACAACCAGTAACTCTCAATCTGATATAGGGTCAGTTCATACTCACAGGCTATCTAGCTCAGCAGTAGAAACTGATACTTTACTGGAAGCCTCAGCTGAACTTGAAGCTGCAGGAGATCTCGCACCCCATAAGACTGAGAGCAAGACTCAACCCTCTGCTAAGAAGTGCAGGTTGATAGTGAAATTGCGGGCGGTCTCTGATCCTAGCTCAACCGAAGATATTGCATCAAATTGTACAACCCTCTCAGAAGCAATGGCTTCTAAAATATGCCCTGTTTGCAAAACCTTCTCATCCTCTTCTAACACCACATTGAATGCTCATATAGATCAGTGCCTTTCTGTGGAATCAACCTCCAGGTGGATGGAGGATTCTAGACAGACCAGACATAGAATAAAGCCAAGGAAAACAAGATTGATGGTGGACATCTGCGCAACAGCACCACGGTGCACGCTTGAGGAGCTTGACAGAAGAAATGGTTCAAACTGGGCCACGGATTTGAGCTTACCTACTCAAAATACTGAGGGGTGTGCCCATGAGAAAAGACAAAGACTTTCACCTGTTCATCCTGAGGAGACTGGCGATGAAGGTGCAGTCTATATTGATGCAAGTGGCACAAAAGTTCGAATTTTGTCAAAGCTTAACGTTCCATCATCTGTCTCAAAAGTAGGAGAGGATCCCCGGACAAGCAAACCATTAAGAGGAAGTAAAGGAAGCAAATTCTTCTCAACCAACAAGAGAAAGCGGCATGTGAACAAATATCATAACTACCTGAAAGTTGCTATTCAGAGCAAAAAAGATTGTTCTCCCAAGGCTCATAATTCTGAGATTCATGGGACTCGGGAAGAAAACTGTGGGGCAGAAGTTCATGAGGAGGAGGAACATCGGGCACATAATTTTAAAGCTCAAGAGCAGATCAAACCCAGTGATTCAGGAACTTTGAGACAGTGGGTATGCTCCAAGCGAACTGGTCTCTCAAAGAAGGTTAATGGTAAAGATGGCCATCAGCGGCCGGCATATAAGTTGCGTACAACACAAGACTTGGCAATTGAGAGTGATCAGTCATGTTTGGGTGATTCTTATGTGGAGAAAAATACTCGAAGATCTCCAAACTTGATGGAGAATGTTATTTCCTCTGAAAGCAAGAAGAAAGTGGAGAATTCTTTGAATGAATCCCGAGGCTATGATGATGGGGAGCAGTCTCCTGGAAGAAAGAGATTGGGAAGTTCCTTGTTTAGAGCCAGAATTAGTGACAATGTGGAGAGGTTTCAGGAACCACTGAAGCAAAATGCAAATCAATTAAGCAAAGAAAATACTTCTGTTTGTGATAGAATTATGCTTAAACGAACAAACACCATAGGAAATCATGTATCTCCACTCAGCAATAAGACATCTGACATTCTTGCAGGTCCTGTCAGAAGCCCTGATAGTTCTACCAGTGCAAACCCAAAACCATACCGGAGTAAATCATTGTCATCAAAAGCCATGAAATCCTCCACTTTGAGGAAGGATGTTTTGTCAGTTCATCAATCATTTTTAAACAAGAAATATTCAGCCTTAAAGAAGCCTTGGGTGCTGCATTCTGAAGCAGAAATAGATGAGGAGTCACCTTCTGAAGGGGATCAACATTATGATATGATGCATGATCATGTTGAAAATCAATCTGGAGTAGAAGAGATTAATGACAGTGTGTGTCTTGATAGAAGCAGTGTGCTGGAAATCAGGCAAGAAAGAGGGGCTATGGGTGTGTCCCAGGGGGAGGATGCCATGGTTTTGAAGAGGTCACAAGCATCTTGGAGTCATGGCCATGATGTAGGGGAAAATATAGATTCTTCTGTCAGAGTCTCTGATGATATGACTGATAAATGTGATGGCCTAGAATCTGCAAGAAAATTGGTTCAAATGCATGCAGCTGACATTGTTATTGAATCCTCCAAAATGTGTCCTGACAGGAATATTACAACTTTGAACAAATCATTAGGTCCCAAATTCAACAAGCTGGCTAATCCTCCGGAAAATGGATCCAGCTCACTGCAACCTATGGAAGAATATAAAGGGCCTCTATGTGAAGATGAAGCATCGTGCCGTTTAACTGATCCAAGTCTGGGAGATGAGCAAGGGATGTTTTGTCTAGATGAAGTTGGCAATGGCATAATTGGGCAAAACTCCTTTTTGGGGGCTGCTATGGAGTCTAAAATTGGGCAAGGGAACTCCTTTCCTGAGGTTGATCCAATACCTATTCCAGGACCCCCAGGTTCATTTTTGCCAAGTCCTAGGGATATGGGCTCTGAAGATTTTCAAGGGCACTCATCATTAACAACAAGCCTGGTTCAATCATCCTCCCAAGATCAACATGATTTGGTTGATGGCGATTCATCTGATTCTCCTATTTCTGCAACATCAACCATCTCAAACTCCACTGTAGCAAGACCTGATTTAAAATGTTCAGAACAGTTATTATCTGTCAGAGCTCATTCAGTTCAAGAGAGGATCAGGTCAGATTTCTCAGCTACTAGCATTTGGCCTGTACTGGAAAATGATCTCATGGTTCCTGAGAAGGTTAGTGTTGGAGCAGAAAGAATCCTTTTGGATGGAGGAAATTTGAAATTCAAAGTGACCTCTTCCATAAAGGGACCTCTCAGTTTCCAAGATGATGATCAGCCATGCTGTTGCTCACGGAAGGAGAGGACCTCTCAAGGTGTTGCTTTAAATTATCAAGAATCACAGCTTCTAAGGCGAAGGACTATGGCTTCAGTAATGTTGCCTGCTATTGGGAAGCAAACAGGCTGCAATATGAATACTAGACCGAACAATTTGAATGTGAGTCCTGAAATGATTTCTATCAGCAACTGTCCTAGTTCAGGATCTGAAAAGGTGGTTTTCCCTGTCATGAAGGCGTCTACTGATACAATTCCTATAAATGGTTCTACTGATGCTGCACTAAAAATCCCAAGTCACAGTGACTGTGATTCTGCCAGTCCATCTGGTTCTAATCCGATTCTCAGGCTGATGGGAAAAAATTTGATGGTAGTCAACAAAGATGAAGTTGCACCTATGCAGCTCGGAGAAACCCAACCAGTTCCACTGAGTAACTGTCCGAATCCACAGTTTCTGAACTTTTCTGGAGTCTCTCATGGCAATGCTCAAAATCCTGACTACCATTACTTTCATCATATGATCCCTCCAGGTTCTTTCAGATATATCCAGGATCCACATAACACAGTAGGGCAGTGTTCTGGTATCAGGTTGCCAAACAGTTTTGAAGGCCACTGTAATCCTAAGACACCACAGGCACTGGAGGGCATGTTTCCTAACAAGCATATGGGTGGTGCTTTTGCAGCTTCCTTGGGACCGCATGACTACAAAGGTGAATACAATTTGGTGACTCAACAGAACAGACCCACAACCAGACTGGGTGCAACATCGGTATATCATATGGAGAAAGCAACAAATTCTCCTCACCCCCAATACAGGAATTCATCTTCCATGGGAAGTTCTATTAAAGAAATCATCATCATTGATGATACTCCTGAAAGTGAAGCTGATTCAACCACTGATGATGCCAAACACACTAAATGCTTGAGAGAAAGCCAGGTACCTTCAGCTGACAATTTAATTCCAGCACCTCCCAATTATAATTTAAGGCATTTGAATCCCCTCTCCCGATACCAGTCGCAAGATCCTTCTTCCCTAGGCGAATCACCGACGGCACACAGCAACTGCTTTATTGTGCCCCCCTCTAGGCGAACAAATACAAGTCCTGTTAAATGGGGTTGTACTTCAGAAAGTTCTGGTATCATTCAGCGGAATCCTTTTATAGCTTCATCGTCCTCAACTGGTCATCTGAGATCCGACTTGTATTATTCTCCAAGCTTGTCATAG 4383 0.4333 MLSVENPPPDPPCPCEISQLKGSDERASDKLALPEVDLFNSGLDDTQLPKFSIRDYVFGTRGKDIKKNWPFSQKNLQLCLKHGVKDVLPPFQSLDSVREGSFKGCVAETCLPDKENICNLDSFRNLNGEPSGWVPSSSDSAQPNLRIAADCIDINSSGSGGEKDFPSSTTSNSQSDIGSVHTHRLSSSAVETDTLLEASAELEAAGDLAPHKTESKTQPSAKKCRLIVKLRAVSDPSSTEDIASNCTTLSEAMASKICPVCKTFSSSSNTTLNAHIDQCLSVESTSRWMEDSRQTRHRIKPRKTRLMVDICATAPRCTLEELDRRNGSNWATDLSLPTQNTEGCAHEKRQRLSPVHPEETGDEGAVYIDASGTKVRILSKLNVPSSVSKVGEDPRTSKPLRGSKGSKFFSTNKRKRHVNKYHNYLKVAIQSKKDCSPKAHNSEIHGTREENCGAEVHEEEEHRAHNFKAQEQIKPSDSGTLRQWVCSKRTGLSKKVNGKDGHQRPAYKLRTTQDLAIESDQSCLGDSYVEKNTRRSPNLMENVISSESKKKVENSLNESRGYDDGEQSPGRKRLGSSLFRARISDNVERFQEPLKQNANQLSKENTSVCDRIMLKRTNTIGNHVSPLSNKTSDILAGPVRSPDSSTSANPKPYRSKSLSSKAMKSSTLRKDVLSVHQSFLNKKYSALKKPWVLHSEAEIDEESPSEGDQHYDMMHDHVENQSGVEEINDSVCLDRSSVLEIRQERGAMGVSQGEDAMVLKRSQASWSHGHDVGENIDSSVRVSDDMTDKCDGLESARKLVQMHAADIVIESSKMCPDRNITTLNKSLGPKFNKLANPPENGSSSLQPMEEYKGPLCEDEASCRLTDPSLGDEQGMFCLDEVGNGIIGQNSFLGAAMESKIGQGNSFPEVDPIPIPGPPGSFLPSPRDMGSEDFQGHSSLTTSLVQSSSQDQHDLVDGDSSDSPISATSTISNSTVARPDLKCSEQLLSVRAHSVQERIRSDFSATSIWPVLENDLMVPEKVSVGAERILLDGGNLKFKVTSSIKGPLSFQDDDQPCCCSRKERTSQGVALNYQESQLLRRRTMASVMLPAIGKQTGCNMNTRPNNLNVSPEMISISNCPSSGSEKVVFPVMKASTDTIPINGSTDAALKIPSHSDCDSASPSGSNPILRLMGKNLMVVNKDEVAPMQLGETQPVPLSNCPNPQFLNFSGVSHGNAQNPDYHYFHHMIPPGSFRYIQDPHNTVGQCSGIRLPNSFEGHCNPKTPQALEGMFPNKHMGGAFAASLGPHDYKGEYNLVTQQNRPTTRLGATSVYHMEKATNSPHPQYRNSSSMGSSIKEIIIIDDTPESEADSTTDDAKHTKCLRESQVPSADNLIPAPPNYNLRHLNPLSRYQSQDPSSLGESPTAHSNCFIVPPSRRTNTSPVKWGCTSESSGIIQRNPFIASSSSTGHLRSDLYYSPSLS* 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0905 1460 PANTHER HAPLESS PROTEIN 1 1457 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 436 470 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 1342 1409 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 534 576 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 160 188 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 158 188 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 386 408 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 435 482 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 902 971 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 931 971 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 1384 1409 - -
Vvi19g0905 1460 Gene3D Classic Zinc Finger 257 282 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 1349 1363 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 546 570 - -
Vvi19g0905 1460 MobiDBLite consensus disorder prediction 621 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0905 Vvi-Chr19 10535196 10540888 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0905 - - vvi:100263414 2892.83