Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0900 ATGGCATCCTCCGCCTTCTTCTCGGCACCGACCTTCTCATCCGCCGCCACCACCCTCCAGAAGCACCTTCCCCACCAATCCTTCCAAGGTCTCAGACCCCTCAGCAAGCCCACTGACCTCTCCCTCACCATCCCCAGAATGTCCACCAGACCCATCCCCAAGAGGAGCGCCGGCGTGGTGAGAGCCGAGCTGAACACCTCTCTGGTGATCAGCTTGAGCACTGGGCTATCCCTCTTCCTTGGGAGGTTCGTCTTCTTCAACTTCCAGAGGGAGAACGTGGCCAAGCAAGTCCCTCAGCAGAACGGCTTGACCCACTTCGAGGCTGGCGACTCAAGGGCCAAGGAGTACGTAAGCCTCCTCAAATCCAACGACCCTGTTGGTTTCAACATCGTTGATGTCCTGGCTTGGGGCTCCATCGGCCACATCGTGGCTTATTACATCCTTGCCACCTCCAGCAACGGCTATGACCCCAAGTTCTTCGGCTGA 486 0.5823 MASSAFFSAPTFSSAATTLQKHLPHQSFQGLRPLSKPTDLSLTIPRMSTRPIPKRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0900 161 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 1 160 IPR016370 -
Vvi19g0900 161 Pfam Photosystem I psaG / psaK 65 155 IPR000549 GO:0009522|GO:0015979|GO:0016020
Vvi19g0900 161 ProSitePatterns Photosystem I psaG and psaK proteins signature. 127 144 IPR000549 GO:0009522|GO:0015979|GO:0016020
Vvi19g0900 161 FunFam Photosystem I reaction center subunit V 66 160 - -
Vvi19g0900 161 Gene3D - 66 160 IPR023618 GO:0009522|GO:0015979
Vvi19g0900 161 NCBIfam photosystem I reaction center subunit V 69 156 IPR017494 GO:0009522|GO:0009535|GO:0015979
Vvi19g0900 161 PIRSF PsaK 1 161 IPR016370 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0900 K08905 - vvi:100244683 306.99