Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0896 ATGTCGGCCTTTGTAGGAAAGTATGCAGATGAACTGATCAAGAACGCCAAGTACATTGCCACCCCTGGAAAGGGCATTTTGGCAGCAGATGAGAGCACTGGCACCATTGGCAAGCGTCTTTCTAGCATTAAGGTTGACAACAATGAACCCAACCGCCAAGCCCTTCGCGAGCTCCTCTTCACCTCTCCCAATGCCTTGTCCTACCTATCTGGTGTCATCCTCTTTGAGGAGACCCTGTACCAAAATACACGTGATGGCAAACCTTTTGTGGAAGTCCTCCAGGAAAACAATGTCATCCCGGGCATCAAAGTTGATAAGGGTACCGTCGAGTTAGCCGGCACAAACGGTGAGACCACAACTCAAGGCTTCGACTCTCTTGGAGCTCGTTGCCAGCAGTACTACAAGGCAGGAGCTCGTTTTGCCAAGTGGCGTTCCGTCCTCAAGATTGGCCCCACCGAACCATCTGAGTTGTCAATCCAGCAAAACGCGCAGGGCCTGGCTCGTTACGCAATCATCTGTCAGGAGAATGGGCTTGTGCCGATTGTTGAGCCGGAGATCTTAACCGATGGGGATCATGACATCAAGAAATGTGCAGCTGTCACTGAAACAGTGCTTGCAGCAGTTTACAAGGCGCTGAATGATCACCATGTTCTTCTGGAGGGAACTCTCCTAAAGCCTAACATGGTCACACCAGGCTCTGCTGGACCAAAGGTATCATCTGAGGTGATTGCTGAGTACACAGTGGCGGCATTGCGCAGAACCGTGCCGCCTGCAGTGCCGGGGATTGTGTTCTTGTCAGGTGGGCAGAGCGAGGAAGAGGCGACACTCAACTTAAATGCTATGAATAAGTTGGAGGTGTTGAAGCCGTGGACGCTTTCATTCTCCTTTGGGCGAGCTTTGCAGCAAAGCACACTCAAGACATGGGGCGGAAAGACGGAGAATGTGGGGAAAGCGCAGGGTGCATTCTTGGGAAGGTGCAAGGCCAATTCGGAGGCCACTCTTGGAAAGTATGAAGGTGGAACCGGTGGTGGGTTGGCTTCTGAGAGCTTGTATGTGAAGGGGTACAAGTACTAA 1074 0.5186 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLSSIKVDNNEPNRQALRELLFTSPNALSYLSGVILFEETLYQNTRDGKPFVEVLQENNVIPGIKVDKGTVELAGTNGETTTQGFDSLGARCQQYYKAGARFAKWRSVLKIGPTEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGDHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVTPGSAGPKVSSEVIAEYTVAALRRTVPPAVPGIVFLSGGQSEEEATLNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKTENVGKAQGAFLGRCKANSEATLGKYEGGTGGGLASESLYVKGYKY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0896 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 1 357 IPR000741 GO:0004332|GO:0006096
Vvi19g0896 357 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 217 227 IPR029768 -
Vvi19g0896 357 FunFam Fructose-bisphosphate aldolase 1 357 - -
Vvi19g0896 357 SUPERFAMILY Aldolase 3 357 - -
Vvi19g0896 357 Pfam Fructose-bisphosphate aldolase class-I 11 357 IPR000741 GO:0004332|GO:0006096
Vvi19g0896 357 CDD FBP_aldolase_I_a 9 337 - -
Vvi19g0896 357 Gene3D Aldolase class I 1 357 IPR013785 -
Vvi19g0896 357 NCBIfam fructose-bisphosphate aldolase class I 12 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0896 Vvi-Chr19 10399854 10401696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0896 1 357 Miscellaneous Gene Families AT3G52930 77.374 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0896 K01623 - vvi:100265177 699.893