Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0895 ATGGACAGATGTTATGATCTGTTGGAAGTCAAAGCAAAGGAAATTGCAATATTGGATGACAAAGATGGGCAGATTCATCTAAAGGGCCTATATCGTGTCCCAATAAGTTCCATGTCTGAATTTTATGAGGTCTTCTCTCGTGGAATTCAGCGCAGAAAAGTTGCACACACAGGGCTTAATGATGTCTCTAGCAGAAGCCATGGAGTCCTTGTGATATCTGTTTCCACTCCTTGTGATGATGGCTCCGATGCTGTTGTTACTTGGAAGTTGAACCTCATCGATTTAGCAGGTAATGAAGACAACAGAAGAACCTGCAATGAAGGGATACGTCTCCAAGAGAGAGCTAAGATCAACCAGTCCTTATTTGTCTTATCAAATGTGATTTATGCCTTTAACAATAACAAGCCCCGAGTACCATACAGAGAAAATAAACTGACCCGGATACTGCAAGATTCCCTTGGAGGAACCAGCCGTGCATTGATGGTTGCTTGTCTGAATCCAGGAGAGTACCAAGAATCTGTTCATACGGTCAGCTTGGCTGCACGGTCGCGCCACATATCTAACTCTGTTCCATCAGCTCAAAAACAAGATACTCCAAATGTTAAAGTTGACATGGAGGCGAAATTGCGTGCCTGGCTTGAATCAAAAGGAAAGACAAAGAGTGCAGAAAGAATGAGGGCACTTGGTTCATCTCTTATGAGCAAAGCTCCTAGTTCTTTGAGCTCTTTGAAGAAGCCCTGTCCATGTCACAGCTCCACAAAAGCAAAGGCTATTACAAACCAAGGTGCTTCTAATGCTAAAGAAAGGGTTCTTTCTGTGCAGCACAGAGATTTATTCTACAATGGAGATTCAGTTGATTCTGGCACAGAGCGTTTCAACTTTGCTGCTGAGAACAATACCAACAATACAGAAGAAGAGTTCAAGGCTGGTGGGGATGGGAGTGCCTCAGAAACAAATACAATTTTACCTGATGATGCATTGGCAAATGACAAGAAGATTCTGAAGCTGTATACTTGGAAGCTTCAGTTTTTAAGGCTCTGTTTCATTTCATATACTGGGATCCATTACCTAGCATAG 1077 0.4253 MDRCYDLLEVKAKEIAILDDKDGQIHLKGLYRVPISSMSEFYEVFSRGIQRRKVAHTGLNDVSSRSHGVLVISVSTPCDDGSDAVVTWKLNLIDLAGNEDNRRTCNEGIRLQERAKINQSLFVLSNVIYAFNNNKPRVPYRENKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNSVPSAQKQDTPNVKVDMEAKLRAWLESKGKTKSAERMRALGSSLMSKAPSSLSSLKKPCPCHSSTKAKAITNQGASNAKERVLSVQHRDLFYNGDSVDSGTERFNFAAENNTNNTEEEFKAGGDGSASETNTILPDDALANDKKILKLYTWKLQFLRLCFISYTGIHYLA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0895 358 PRINTS Kinesin heavy chain signature 89 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 PRINTS Kinesin heavy chain signature 57 74 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 PRINTS Kinesin heavy chain signature 138 159 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 Pfam Kinesin motor domain 2 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 ProSiteProfiles Kinesin motor domain profile. 1 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 SMART kinesin_4 1 194 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0895 358 Gene3D Kinesin motor domain 1 228 IPR036961 -
Vvi19g0895 358 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 214 IPR027640 GO:0003777|GO:0007018
Vvi19g0895 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 215 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0895 Vvi-Chr19 10387374 10388450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0895 2 225 Calmodulin-binding Proteins AT5G65930 32.314 3.16e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0895 K10403 - vvi:104877678 673.7