Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0884 ATGGGTCAAATTCTCTCCATTATTATTCGCTGGTTGTGGGGTGAAAAAGATGATAAAAAGAAGCCAAGTGAAAAACTACCCCTGATTTCTCCACCGAAATTGGGCTCAGACACCAACTCTTCAAGCTCAAGGCCTGCGTTGCAACCAAATCCAATTACTTCTCCACCGAGCTTAGGATCATGTAGGGACTACACATTGCAGACAAATCTACGGACTCATCCTACGCCTCCACTGAGCTCTAGCTCTAACTCTAGCTCTAGCCCATTCACCCACTCCAAAACAAGTGGTGCATCACGTCTTCAGCCAACACTACAGACTCATCATCAACTCAACTCGAGCTCATGTGGCCTCTCTATCGCCACTGTATCATCCCCTGTCCAGCCAAAACTAGAGACTCACCAACAACTGAGTTCTAGCTCATGCAGCCAATCCAGCACAACCCATTTTTACCCAAAACCAGTGCAGACTCATCAGCCACTCAACTTGAGCTCATGTGGCCTCTCCAGCACGACTGTATCATCCCCTGTCCAGCCAAAACTAGAGACTCAACAACAGCTAAGTTCTAGCTCATGCAACCAATCCAGCACAACCCATTTTTACCCAAAACCAGTGCAGACTCCTCAGCCACTCAGCTCCAACTCGTGTGGCCTATCCAGGCCAAGTGGTACTTCTCATGCTCAGCCAAAGATACAGACTCATCCTTCACTACTCTCTAGCTCCTGCAGCCACTCTAGCGTGAGTGGTGCATCCCATTTCCAGCCAAATCCAGTGACTCTTCCACTGAGCTCTGTCCCAAGCAGCAACTCAGGCATCAATGGTGCATCGCAGCGAAACTCTCTGGGTTTTCCACTGAGCTTGGACCCACGCAGCAATTCCAGGTCTGATGATGCATTGGATCTGTTAATTCCTGCAAAATTTAAAAACCAAGTTGTAGGTGATGAGAAGCAAGTTTCTGCACGGCTCCACCATTACAACATAATTGAAGAAAACGAAGAACGAACCAGAGTGGTAGGAAAAAATTGGTGGGACTGTAGCAGCTGTGAAGAAGACCTAGAGGAAGGAAAGCTTAGAGTAAGATGGATAAAGCACTACAGCAGTGAGTACAAAATATTGCTGGTGGGTGAAGGGGACTTCTCATTCTCTGCGTCTTTGGCTGTGGCTTTTGCTTCTGCTACAAATATAACCGCTACTTCTCTTGATTCTATAGAGTTTTTGAGCACAAACTATAGGCATGCCTTGCCCAACATCGATAAACTCCGGAGCTTGGGTGCTAAGGTCATGCATGATGTTGATGCCACCAAAATGGCAAACGTTTTCCCATTCAAATGCATGCGTTTTGATCGAGTTGTTTACAACTTCCCACTCGCTGGATTTTTTCCCGATGAACCCAGGGAGGATGAGATCTGGCGACATCGGATGCTGGTACAACAGTTTTTAGAAAATGCGAAGAAGTTGATTCACATAGATGGAGAAATCCACATTACTCACAAAAGCAATGGCTTCTTTTATGAGTGGAATTTGGAATTTCTAGCCTCAAGAGTTGGGCTAAGACTTATAGAAGAAGTGCCCTTCAATTTTAGGGACTACCCAGGGTACCGCACCAAGTATGGCTTTGGGGGTGACAGTAACTTCAACTGCAGTCCTAGCAAAACTTACAAATTTGGGCATAAAAAAACGACTGAGAAGCCTAGCTACAGATTTATGAAATGA 1710 0.4591 MGQILSIIIRWLWGEKDDKKKPSEKLPLISPPKLGSDTNSSSSRPALQPNPITSPPSLGSCRDYTLQTNLRTHPTPPLSSSSNSSSSPFTHSKTSGASRLQPTLQTHHQLNSSSCGLSIATVSSPVQPKLETHQQLSSSSCSQSSTTHFYPKPVQTHQPLNLSSCGLSSTTVSSPVQPKLETQQQLSSSSCNQSSTTHFYPKPVQTPQPLSSNSCGLSRPSGTSHAQPKIQTHPSLLSSSCSHSSVSGASHFQPNPVTLPLSSVPSSNSGINGASQRNSLGFPLSLDPRSNSRSDDALDLLIPAKFKNQVVGDEKQVSARLHHYNIIEENEERTRVVGKNWWDCSSCEEDLEEGKLRVRWIKHYSSEYKILLVGEGDFSFSASLAVAFASATNITATSLDSIEFLSTNYRHALPNIDKLRSLGAKVMHDVDATKMANVFPFKCMRFDRVVYNFPLAGFFPDEPREDEIWRHRMLVQQFLENAKKLIHIDGEIHITHKSNGFFYEWNLEFLASRVGLRLIEEVPFNFRDYPGYRTKYGFGGDSNFNCSPSKTYKFGHKKTTEKPSYRFMK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0884 569 MobiDBLite consensus disorder prediction 128 155 - -
Vvi19g0884 569 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 371 535 IPR019446 GO:0070042|GO:0070475
Vvi19g0884 569 MobiDBLite consensus disorder prediction 167 276 - -
Vvi19g0884 569 PANTHER PHENYLALANYL-TRNA SYNTHETASE 332 557 - -
Vvi19g0884 569 MobiDBLite consensus disorder prediction 33 111 - -
Vvi19g0884 569 MobiDBLite consensus disorder prediction 18 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0884 Vvi-Chr19 10189181 10191191 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0884 K19307 - vvi:104877636 1086.63