Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0878 ATGTACAAGAAAGCAAAATCAAATTTGGAAGCTTTAGAGAAGCTGGGAGCATCTCTTTTATTTGGAGTGGATGCAACCAAGATGAAGCTTCATACTGATCTGAAGATGTGGAAATTCGACCGCATTATATATAACTTTCCTCATGCAGGCTTCCATGGAAAGGAAGACAACAGGCTTATGATTAATATGCATAGGGATCTTGTGCATGGTTTCTTCAGGAATGCAAGTGGCATGCTAAGAGCCAATGGTGAAATTCATGTAAATCACAAAACCACAGCTCCATTTTCCCACTGGAATCTTGAGGAACTTGCTTCTCAAAACTCTCTGGTGCTGTTTGAGTGTGTTGATTTTAAGAAAGAGGACTACCCAGGCTATAACAATAAGAGAGGAGCTGGTTCAAGATGTGATGAGCCCTTCCGTTTGGGAGCTTGCGGTACTTTCAAATTCAGATTCTCCCCCATTGCTATGAAAATGTCCAGAATCGTGTGCCACTCTGATTTAAATCACCGAGGATCTCAGCAAATTAATCTAATGCAAATGCAGCAGTGGCCAGGTTCATCTGATTACAGAGGTCCTGGAAGAAATATTTTAGCAAATATGAATGGCATCCCAAGGCATATGGGGTTACCTTTAACAATCTTTGATGGATACTTCAATCATGCTGTGGAAACATTTGGAAGAAATGGTTACGATGTGGGCTATACTGTTCATGAAGCATTTAGGCTTGGCTTTGAAAGATATATGGCTGAAGGTCCAGGAAGAACCTTGACTGGTTACATAAACCTTCTGCAAGAGCTTCAACATTTGAGCAGGTTGAGATCAGCATTCCTACAAAGGATGTTATTGGGTCCTGATCACTACTTGTAA 867 0.4095 MYKKAKSNLEALEKLGASLLFGVDATKMKLHTDLKMWKFDRIIYNFPHAGFHGKEDNRLMINMHRDLVHGFFRNASGMLRANGEIHVNHKTTAPFSHWNLEELASQNSLVLFECVDFKKEDYPGYNNKRGAGSRCDEPFRLGACGTFKFRFSPIAMKMSRIVCHSDLNHRGSQQINLMQMQQWPGSSDYRGPGRNILANMNGIPRHMGLPLTIFDGYFNHAVETFGRNGYDVGYTVHEAFRLGFERYMAEGPGRTLTGYINLLQELQHLSRLRSAFLQRMLLGPDHYL* 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0878 288 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 2 129 IPR019446 GO:0070042|GO:0070475
Vvi19g0878 288 PANTHER PHENYLALANYL-TRNA SYNTHETASE 3 153 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0878 Vvi-Chr19 10049239 10051205 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0878 - - vvi:100258359 604.749