Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0877 ATGCATTGGATCTTGGTAGGAAAAAATTGGTGGGACTGTGGCAGCTGTGAAGAAGACCTAGAGGAAGGAAAGCTTAGAGTAAGATGGATAAAGCACTACAGCAGTGAGTACAAAATATTGCTGGTGGGTGAAGGGGACTTCTCATTCTCTGCGTCTTTGGCTGTGGCTTTTGCTTCTGCTACAAACATAACCGCTACTTCTCTTGATTCTATAGAGTTTTTGAGCACAAACTATAGGCATGCCTTGTCCAACATCGATAAACTCCGGAGCTTGGGTGCTAAGGTCATGCATGATGTTGATGCCACCAAAATGGCAAACGTTTTCCCATTCAAATGCATGCGTTTTGATCGAGTTGTTTACAACTTCCCACTTGCTGGATTTTTTCCCGATGAACCCAAAGAGGATGAGATCTGGCGACATCGGATGCTGGTACAGCAGTTTTTAGAAAATACGAAGAAGTTGATTCACATAGATGGAGAAATCCACATTACTCACAAAAGCAATGGCTTCTTTTATGAGTGGAATTTGGAATTTCTAGCCTCAAGAGTTGGGCTTCGACTTATAGAAGAAGTGCCCTTTAATTTTAGGGACTACCCAGGGTACCGCACCAAGTATGGCTTTGGGGGTGACAATAACTTCAACTGCAGTCCCAGCAAAACTTACAAATTTGGGCATAAAAAACCAATTGAGAAGCCTAGCTACAGATTTATGAAATGA 717 0.424 MHWILVGKNWWDCGSCEEDLEEGKLRVRWIKHYSSEYKILLVGEGDFSFSASLAVAFASATNITATSLDSIEFLSTNYRHALSNIDKLRSLGAKVMHDVDATKMANVFPFKCMRFDRVVYNFPLAGFFPDEPKEDEIWRHRMLVQQFLENTKKLIHIDGEIHITHKSNGFFYEWNLEFLASRVGLRLIEEVPFNFRDYPGYRTKYGFGGDNNFNCSPSKTYKFGHKKPIEKPSYRFMK* 239
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0877 238 PANTHER PHENYLALANYL-TRNA SYNTHETASE 28 224 - -
Vvi19g0877 238 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 40 204 IPR019446 GO:0070042|GO:0070475
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0877 Vvi-Chr19 10028999 10030110 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0877 K19307 - vvi:100853612 483.026