Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0876 ATGTCATCCATGCTTTCTTCCTCACAGAATTTATACCCTGTCGACACCATCCCTGCTGATTTCTTCGATGGCCTTACAAGTATTCGGATCCTCGCTCTGAACGACAATCTGTTCAATGTAACTACTGGTTTACATTATTTGAAGGGACAATTAGAAGGCTGTCAGTCACCAAAACAGAAACGTCAGAATGGGATCTCACTGGTTAGAACATTGTTGGTAGTTAGTTTAGTTTCTCCTACGATGGCTCCAGAAGGGACAGCACAGACTGCTGCTAAAGAACTTCTTGATTCAATTTTGGACATTGTCATTGATTTGGTCATGAAAGATGAAGTGCTGCACTCATTAGCTTGGTTGATTAGCACCAATGCTGGCGAGTTTCGGAGCACTCTTTTCAGCTTTAAAGAGCCTATGAAACGGAGAGCAGAGCTGCTTGGAAGACTGTACAGTCGTTGTTTATCCTTGAATCTGGAGAGCGGAAATGCCATCATAATCTGGGTAATTCATGTCTTAGTAACAGGAAGTGCTGGCTATATTAGTTCACATGCTGCACTACGACTTCTCAAGGACTCATACTGTGTAACTATAGTGGATAACTTCTCGAGGAGAAAATTAAGTGCCATTAAGGTTTTACAAGAACAATTTCCTGAACCTGGGAGGCTTCGATTTATTTATGTTGACCTGGGAGATGTAAAAATTGTAAACATGATATTTTTAGAAAATGCATTTGATGCTATAATGTATTTTGCAGTTGTTGCTTATATTGGAGAAAACACCCTTGAACCTCTCAGGTTGGGAGAAGTGGTGAAATCATTTGTGAAGTATCTGAATTTGAGTGTGGGTACAGTCACTGGTAGGTCTGATTTGGTTGAACATGGTGGGAGGCCAAGGTTGGATGATAATTGCAGGGATGATGATCAGCATGGTTCAGTTAGATCGATTGGTGTAGGGATCAGCAGTGATGCTGCTAATATTGGCAGTGAAGTACCAGAAAATTTGGTTGGAGGTAGTTGTGAAGAGGATTTGAAGTATTTTCATGATTATGATATTGGATTAAGACAGTCTCAACAGGAATCTGATAAGAAATATAATGATAGATCAAAGAGGGTTAAAAAGAGAACAAGTACCTATGATTCTGATAAATGA 1143 0.3981 MSSMLSSSQNLYPVDTIPADFFDGLTSIRILALNDNLFNVTTGLHYLKGQLEGCQSPKQKRQNGISLVRTLLVVSLVSPTMAPEGTAQTAAKELLDSILDIVIDLVMKDEVLHSLAWLISTNAGEFRSTLFSFKEPMKRRAELLGRLYSRCLSLNLESGNAIIIWVIHVLVTGSAGYISSHAALRLLKDSYCVTIVDNFSRRKLSAIKVLQEQFPEPGRLRFIYVDLGDVKIVNMIFLENAFDAIMYFAVVAYIGENTLEPLRLGEVVKSFVKYLNLSVGTVTGRSDLVEHGGRPRLDDNCRDDDQHGSVRSIGVGISSDAANIGSEVPENLVGGSCEEDLKYFHDYDIGLRQSQQESDKKYNDRSKRVKKRTSTYDSDK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0876 380 PANTHER UDP-GLUCOSE 4-EPIMERASE 168 264 - -
Vvi19g0876 380 Pfam GDP-mannose 4,6 dehydratase 170 266 IPR016040 -
Vvi19g0876 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 262 IPR036291 -
Vvi19g0876 380 Gene3D - 169 263 - -
Vvi19g0876 380 MobiDBLite consensus disorder prediction 354 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0876 Vvi-Chr19 10015288 10018128 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0876 K12448 - vvi:100259390 157.918