Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0873 ATGAAGCAAAAGATAATTGTGAAAGTGCAAATGAACTGTGACAAATGCAGAACCAAAGCCATGAAGATTGCTGCAGTTGAAGAAGGTGTGATCTCAGTGGCAATAGAAGGAGCAGAAAAAGATCGGGTTGTGGTGATTGGAGACGGAGTTGATTCAGCTAGCTTGACCCACTGTCTGAGGAAGAAGCTTGGGTATGCGACTCTTGTAAGCGTGGAAGAAGTAAAGGAAAAAGTTGACAAGGGCAAAGGTGATGAAAAGCCAAAGCCAGATCCGAAGCCAGCTCCGAAGACTTGTTGTCAAAGCCAACAGGTTTTAATTGCTAGCATGGGCTATGCAGATGAACCTAATTGCTCCATCATGTGA 363 0.4435 MKQKIIVKVQMNCDKCRTKAMKIAAVEEGVISVAIEGAEKDRVVVIGDGVDSASLTHCLRKKLGYATLVSVEEVKEKVDKGKGDEKPKPDPKPAPKTCCQSQQVLIASMGYADEPNCSIM* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0873 120 MobiDBLite consensus disorder prediction 76 97 - -
Vvi19g0873 120 SUPERFAMILY HMA, heavy metal-associated domain 2 65 IPR036163 GO:0046872
Vvi19g0873 120 MobiDBLite consensus disorder prediction 76 92 - -
Vvi19g0873 120 ProSiteProfiles Heavy-metal-associated domain profile. 2 71 IPR006121 GO:0046872
Vvi19g0873 120 Gene3D - 1 77 - -
Vvi19g0873 120 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 47 1 101 IPR042885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0873 Vvi-Chr19 9975327 9975956 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0873 - - vvi:100853541 204.912