Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0870 ATGAAGCAAAAGATAATTGTGAAAGTGCAAATGAACTGTGACAAATGCAGAGCCAAAGCCATGAAGATTGCTGCAGTTGAAGAAGGTGTGATCTCAGTGGCTATAGAAGGAGCAGAAAAAGATCGGGTTGTGGTGATTGGAGACGGAGTTGATTCAGCTAGCTTGACCCACTGCCTGGGGAAGAAGCTTGGGTATGCGACTATTGTAAGCGTGGAAGAAGTAAAGGAAAAGCCAAAGCCAGATCCGAAGCCAGCTCCGAAGACTTGTTGTCAAAGCCAACAGGTTTTAATTGCTAGCATGGGCTACGCAGATGAACCTAATTGCTCCATCATGTGA 336 0.4554 MKQKIIVKVQMNCDKCRAKAMKIAAVEEGVISVAIEGAEKDRVVVIGDGVDSASLTHCLGKKLGYATIVSVEEVKEKPKPDPKPAPKTCCQSQQVLIASMGYADEPNCSIM* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0870 111 Gene3D - 1 77 - -
Vvi19g0870 111 SUPERFAMILY HMA, heavy metal-associated domain 2 66 IPR036163 GO:0046872
Vvi19g0870 111 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 47 1 88 IPR042885 -
Vvi19g0870 111 ProSiteProfiles Heavy-metal-associated domain profile. 2 68 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0870 Vvi-Chr19 9922208 9922814 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0870 - - vvi:100264837 199.134