Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0869 ATGACTGCATCGGTTAATATAGTTGTAGGTTCTCATGTATGGGTTGAAGATCCAGTGGATGCATGGATTGATGGTGAAGTTTCTAGGATCAATGGTCTTGAGGTTCATGTTCATACCACAAAAGGAAAAACAGTTGTTGCGAATATGTCTAAGGTGTTCCAAAGGATACTGGATCTCCACCTGGAGGTGTAG 192 0.4167 MTASVNIVVGSHVWVEDPVDAWIDGEVSRINGLEVHVHTTKGKTVVANMSKVFQRILDLHLEV* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0869 63 Pfam Myosin N-terminal SH3-like domain 10 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi19g0869 63 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi19g0869 63 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Vvi19g0869 63 SUPERFAMILY Myosin S1 fragment, N-terminal domain 12 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0869 Vvi-Chr19 9888097 9888288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0869 1 49 Myosins gene family AT1G17580 71.429 2.93e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0869 K10357 - vvi:100266890 96.6709