Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0861 ATGTTCTACTCCTATAACAAGAACATCAATGGCTTCGCTGCAATCCTCGAAGAGGAAGAAGCAGCGGAAATTGCAAAGCATCCAAATGTTATATCAGTTTTCTTGAACAAGGGAAGGAAACTGCACACAACCCGGTCATGGCATTTCCTTGACTTGGAAAAGAATGGAGTCATTCAACCGAATTCAATTTGGAAGAAAGCCAGGTTTGGTGAAGATACAATTATCGGAAACCTTGACACAGGTGTTTGGCCTGAATCAAAGAGCTTTAGTGATGAGGGAATGGGACTAGTTCCATCAAAGTGGCGGGGGACATGTCAGGATGAAACCAAAAATGCTGTTACTTGCAACAGGAAGCTTATTGGAGCAAGGTACTTCAACAAAGGTTATGCTGCTTATGCTGGTCCACTCAACTCCTCCTTCAACTCAGCGCGCGACCATGAAGGACATGGCTCCCACACCCTATCTACTGCTGGGGGTAGCTTAGTTTATGGAGCAAGTGTGTTTGGTTATGGTAATGGTACCGCAAAAGGCGGGTCACCAGGAGCTCGTGTGGCTGCTTACAAGGTGTGCTGGCCCCAAGTCAACAATGGTGGGTGCTTTGATGCAGACATCATGGCTGCATTTGATGCTGCTATACACGATGGTGTTGATGTTCTATCAGTATCTCTTGGTGGGGACGCCAGTGATTATTTCACAGATGGTCTTGCAATTGGTTCTTTCCATGCTGTTAAGAGGGGCATTGTTGTAGTTTCCTCTGCTGGAAATGATGGGCCAAAGGATGCGTCGGTATCAAACGTATCACCCTGGATGATAACGGTTGGTGCTAGTACCATTGACAGGGAATTCACAAATTACGTTGCTCTTGGCAATAGAAAGCACCTCAAGGGCATGAGCCTCTCAACCAAAGGCTTGCCATCAAACAAGTTCTATCCAGTGATCAGCAGTTTAGATGCTAAAGCTGCCAATGCGTCTGCTCAAGATGCCATTCTCTGTAAGCCCGGAACCCTCAACCCAAAGAAGGTGAAGGGGAAGATCTTGGTCTGCCTTCGAGGGGAAAATCCAAGAGTTGACAAGGGCGAGCAGGCTGCACTTGCAGGCGCTGTTGGGTTCATTCTAGCTAATGATATGCAGAGTGGAAATGAACTCATAGCCGACCCTCACGTGCTTCCTGCTTCCCATGTCAACTTCTCTGATGGTGCAGCTGTCTTTAATTACATCAACTCTACCAAGAACCCCATGGCTTACCTAACCCGTGTGAGGACCCAATTGGGAATAAAGCCTGCTCCATTTATGGCCTCTTTTTCATCGAAGGGACCCAACACCATTACACCAGAAATTCTCAAGCCTGATATAACTGCCCCAGGGGTGAATATCATAGCTGCATACAGCGAATCAATAGGGCCAACTGATCAAACATTTGACAAACGTCGAATTCCTTTCAACGCACAATCAGGCACATCCATGTCCTGCCCTCACATCTCTGGCATTGTGGGCCTTCTCAAAACCCTTCACCCTGATTGGAGCCCTGCAGCTATCAAATCCGCAATCATGACAAGTGCAAGAACACGAGATGACAATATGGAGCCGATGCTGAACTCATCAAACCTTAAAGCAACTCCATTCAGCTATGGTGCAGGCCATGTTAGACCAAACCGGGCCATGGATCCTGGACTGGTATATGACTCCACTGTTAATGACTACCTCAACTTCCTATGTGCCATTGGGTACAATGAGACCCAACTTCAAATATTCTCACAGAAGCCATACAAGTGCCCCAAGTCCTTCAGTCTCACAGGCTTCAACTACCCTTCAATCACAGCTCCTAATCTCTCAGGCTCAGTTACCATTTCCAGAACTGTCAAGAATGTTGGCACTCCCGGCACGTATACGGCGAGTGTCAAGGCACCACCTGGAATTTCAGTTGCGGTGAAGCCCAATAAATTGGAGTTCAGGGAGTATGGTGAGGAGAAGAGCTTCCGTCTTACCCTGAAAGCTAAAGGACGTCGGGTGGCTGAGGACTATGTTTTCGGACGATTGATATGGTCAGATGGTCAGCACTACGTTAGGAGTTCTATTGTTGTCAAGGCCTAA 2091 0.473 MFYSYNKNINGFAAILEEEEAAEIAKHPNVISVFLNKGRKLHTTRSWHFLDLEKNGVIQPNSIWKKARFGEDTIIGNLDTGVWPESKSFSDEGMGLVPSKWRGTCQDETKNAVTCNRKLIGARYFNKGYAAYAGPLNSSFNSARDHEGHGSHTLSTAGGSLVYGASVFGYGNGTAKGGSPGARVAAYKVCWPQVNNGGCFDADIMAAFDAAIHDGVDVLSVSLGGDASDYFTDGLAIGSFHAVKRGIVVVSSAGNDGPKDASVSNVSPWMITVGASTIDREFTNYVALGNRKHLKGMSLSTKGLPSNKFYPVISSLDAKAANASAQDAILCKPGTLNPKKVKGKILVCLRGENPRVDKGEQAALAGAVGFILANDMQSGNELIADPHVLPASHVNFSDGAAVFNYINSTKNPMAYLTRVRTQLGIKPAPFMASFSSKGPNTITPEILKPDITAPGVNIIAAYSESIGPTDQTFDKRRIPFNAQSGTSMSCPHISGIVGLLKTLHPDWSPAAIKSAIMTSARTRDDNMEPMLNSSNLKATPFSYGAGHVRPNRAMDPGLVYDSTVNDYLNFLCAIGYNETQLQIFSQKPYKCPKSFSLTGFNYPSITAPNLSGSVTISRTVKNVGTPGTYTASVKAPPGISVAVKPNKLEFREYGEEKSFRLTLKAKGRRVAEDYVFGRLIWSDGQHYVRSSIVVKA* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0861 696 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Vvi19g0861 696 Gene3D - 279 423 - -
Vvi19g0861 696 SUPERFAMILY Subtilisin-like 41 558 IPR036852 GO:0004252|GO:0006508
Vvi19g0861 696 Pfam PA domain 327 401 IPR003137 -
Vvi19g0861 696 FunFam p69E protein-like 571 696 - -
Vvi19g0861 696 SUPERFAMILY PA domain 329 419 IPR046450 -
Vvi19g0861 696 CDD PA_subtilisin_like 285 416 - -
Vvi19g0861 696 FunFam subtilisin-like protease SBT1.5 279 423 - -
Vvi19g0861 696 FunFam Subtilisin-like protease SBT1.5 72 292 - -
Vvi19g0861 696 Gene3D Peptidase S8/S53 domain 72 567 IPR036852 GO:0004252|GO:0006508
Vvi19g0861 696 ProSiteProfiles Serine proteases, subtilase domain profile. 46 554 - -
Vvi19g0861 696 ProSitePatterns Serine proteases, subtilase family, serine active site. 485 495 IPR023828 -
Vvi19g0861 696 PRINTS Subtilisin serine protease family (S8) signature 70 89 IPR015500 -
Vvi19g0861 696 PRINTS Subtilisin serine protease family (S8) signature 484 500 IPR015500 -
Vvi19g0861 696 PRINTS Subtilisin serine protease family (S8) signature 145 158 IPR015500 -
Vvi19g0861 696 Gene3D - 571 696 - -
Vvi19g0861 696 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 694 IPR045051 -
Vvi19g0861 696 CDD Peptidases_S8_3 40 520 IPR034197 -
Vvi19g0861 696 Pfam Fibronectin type-III domain 600 694 IPR041469 -
Vvi19g0861 696 Pfam Peptidase inhibitor I9 2 42 IPR010259 -
Vvi19g0861 696 Pfam Subtilase family 70 532 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0861 Vvi-Chr19 9748021 9752206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0861 1 695 Subtilisin-like Serine Gene Family AT5G59810 64.419 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0861 - - vvi:100251507 1383.62