Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0834 ATGGACCAGGGTGCATGGGCAGCACTGCCCAAAGACCCATCAGAAGAAGACTTCTGTCTCGCTCTCCGCAATGGCCTCATTCTTTGCAATGTCCTCAACAAAGTCAATCCTGGCGCTGTTCTCAAGGTGGTGGAGAACCCCATCATCGCTGTCCAGTCCACTGAAGCTGCTGCCCAGTCTGCAATTCAGTACTTTGAGAACATGAGGAATTTTCTGGTTGCTGTTGGGGCCATGAAGCTCTTGACTTTCGAAGCTTCCGATTTGGAGAAGGGAGGCTCATCAAGTAAAGTTGTTGATTGCATTCTCTGTCTGAAAGGCTATTATGAGTGGAGGCAAGCAGGGGGAATTGGGGTTTGGAGGTATGGGGGGACCGTAAGGATCACATCCCTCCCGAAGGAATCACCATCCTCCTTGGTTGGCAGTGAAAGTGCTGATGAGTCATTGGATGAATCTGAATCGTCTCAATATGAGCAGCTATTAGAATATCTCCATCTTTCTAGTGAGGTCTCAACAGAAGGATCCAAAGCAGCTGATGCTCTGACATTTCTGTTTGATCGTTTTGGTCTTGGACTTCTACAGGCTTATCTTACTGACAAGAATGGAATTGAAGACTGGCCTTTGAATGAAATGGTCATTGATACTTTGCTCAGGAAGGTAGTTGAGGATTTTTCAGGGCAAATTGTTTCTCAGTACAATCAGCTTGGAATGATTTTGAAGAAAATTCTGAAAGGTGACACTATTCCTCTATCAAAACATGAATTCCTAGAAGCCATTACACAATATCTTGATAAGAAAAATAGTTTGGCATTGAGTAATCTCTCCAAATTCTGCATCTGTGGAGGGAAACGAGAGGTGGTCAGGCATAGCAATAATCTGTCTGCTGATCACGCACAACTACTCAATCTCCATCAGAGACAGGTCCAGGAGCTAAAATCATTTTTTCATGAGACAAAACTAGAAGTTAAACAGATTCAATCCAACTGGGATGAAGAAGTTAGAAGACTTGTGTACCATGTTAAAGGACTTGAGGTAGCTGGGTCTTCCTATCAGAAGGTTTTAGAGGAGAACCGCCTGCTTTACAATCAAGTTCAAGACCTGAAAGGAACCATAAGGGTTTACTGTAGGGTGAGGCCCTTCTTACCAGGTCAATCAAATGGGCAGTCTACAGTAGAATATATTGGAGAAAATGGAAATATCATGATTGTCAATCCTCTCAGGCAAGGAAAAGATGCAAGAAAGGTGTTTTCATTCAACAAAGTTTTTGGGACAAATGTGACACAAGAGCAAATATATGAAGACACTCAACCATTGGTCAGATCTGTTCTAGATGGTTTTAATGTTTGCATTTTTGCATATGGGCAGACAGGCTCAGGGAAGACGTACACAATGAGTGGACCTGATTTAACAACTCAGGAGACATGGGGCGTAAATTATCGGGCTCTGCGTGACTTATTCCAAATCTCAAAAGCAAGGGTGGATGCCATAGAATATGAAGTTGGAGTCCAAATGATTGAGATATACAACGAACAAGTCAGAGATCTATTAGAATCAACTTCACATATTTATTTCAATTCCTTAACTACCTGCACATTAGATATCCGGAACAATTCTCAATTGAATGGCCTTAATGTGCCTGACGCAAGTTTACTTCCAGTTACATGTACTCAAGATGTTCTTGAGTTGATGAGAATTGGCCAAAGGAATCGTGCTGTGGGTGCTACTGCTTTAAATGAGCGAAGTAGCCGTTCTCATAGTGTGTTAACAGTTCATGTCCAGGGAAGGGAGTTGGTTTCTGGATCCATTCTTAGGGGCTGCCTCCATCTAGTTGATCTGGCAGGAAGTGAGAGAGTAGATAAATCTGAGGCCGTTGGTGAAAGACTGAAAGAAGCCCAACATATAAATAGATCTCTTTCAGCACTTGGAGATGTCATCTCTGCTCTTGCTCAGAAGAGTCCACATATTCCTTATAGGAACAGCAAGCTTACTCAAGTATTGCAAGACTCTTTAGGCGGGCAAGCGAAAACATTGATGTTTGTACATATAAATCCTGAAGTTAATGCTATTGGAGAAACAATTAGCACACTCAAGTTTGCAGAGAGGGTCTCCTCCATAGAACTTGGGGCAGCTCGATCTAACAAAGAAACTGGTGAAATCCGAGATCTTAAAGAAGAGGTTTATATTCTGTAA 2187 0.4239 MDQGAWAALPKDPSEEDFCLALRNGLILCNVLNKVNPGAVLKVVENPIIAVQSTEAAAQSAIQYFENMRNFLVAVGAMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWRQAGGIGVWRYGGTVRITSLPKESPSSLVGSESADESLDESESSQYEQLLEYLHLSSEVSTEGSKAADALTFLFDRFGLGLLQAYLTDKNGIEDWPLNEMVIDTLLRKVVEDFSGQIVSQYNQLGMILKKILKGDTIPLSKHEFLEAITQYLDKKNSLALSNLSKFCICGGKREVVRHSNNLSADHAQLLNLHQRQVQELKSFFHETKLEVKQIQSNWDEEVRRLVYHVKGLEVAGSSYQKVLEENRLLYNQVQDLKGTIRVYCRVRPFLPGQSNGQSTVEYIGENGNIMIVNPLRQGKDARKVFSFNKVFGTNVTQEQIYEDTQPLVRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLTTQETWGVNYRALRDLFQISKARVDAIEYEVGVQMIEIYNEQVRDLLESTSHIYFNSLTTCTLDIRNNSQLNGLNVPDASLLPVTCTQDVLELMRIGQRNRAVGATALNERSSRSHSVLTVHVQGRELVSGSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGQAKTLMFVHINPEVNAIGETISTLKFAERVSSIELGAARSNKETGEIRDLKEEVYIL* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0834 728 FunFam kinesin-like protein KIN-14F 364 728 - -
Vvi19g0834 728 ProSiteProfiles Kinesin motor domain profile. 369 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 Pfam Kinesin motor domain 375 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 CDD KISc_C_terminal 367 706 - -
Vvi19g0834 728 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 723 IPR027640 GO:0003777|GO:0007018
Vvi19g0834 728 Gene3D Kinesin motor domain 311 706 IPR036961 -
Vvi19g0834 728 CDD CH_AtKIN14-like 7 105 - -
Vvi19g0834 728 Pfam Calponin homology (CH) domain 15 109 IPR001715 GO:0005515
Vvi19g0834 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 727 IPR027417 -
Vvi19g0834 728 FunFam kinesin-like protein KIN-14F 1 109 - -
Vvi19g0834 728 SMART kinesin_4 367 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 MobiDBLite consensus disorder prediction 131 150 - -
Vvi19g0834 728 Gene3D - 5 109 IPR036872 -
Vvi19g0834 728 PRINTS Kinesin heavy chain signature 654 675 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 PRINTS Kinesin heavy chain signature 574 591 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 PRINTS Kinesin heavy chain signature 444 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 PRINTS Kinesin heavy chain signature 605 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi19g0834 728 ProSiteProfiles Calponin homology (CH) domain profile. 1 109 IPR001715 GO:0005515
Vvi19g0834 728 SUPERFAMILY Calponin-homology domain, CH-domain 12 137 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0834 Vvi-Chr19 9231262 9237187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0834 360 704 Calmodulin-binding Proteins AT5G65930 41.449 1.16e-74 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0834 K10406 - vvi:100241162 1359.74