Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0821 ATGTTTCCTGTGTTCCCCAATTCCAATGAAGGGAAGTCAGTTCAACTCAGCCCTTTGTCTTTAGGGGCGCATCTCCAAGGAGCCCAGCAATTTCAAACCCCATCATCTCTTGTTTCAGACATGATCCAACCAGCAAATTTTGTTCTTTCTGGAAACTGGGAAAACGCCCAAGAATCTCTACAAAATTGGATGAGAATGAAGAGCCTGAGAAACAAAGAAAAGACTTTGCTATCCATCGGAAATGGGTCAGGATCAAGCCAGTTCCCAATTCACAGAGCTGGCAATGTTTTGGAACCAATGGGATCTGCAGGCTTTGGGGTCGGACATGGAGGGGCTGGAGACGGGCATCAGAAGGAACTACCTCATCAAGTCATCAATGGCTTCAGCATGGTGAATCCCTATGAAGTGAATGCAGAGAAACAAGCTGTTCAGGGGGCACACCCTTACCATCAGTTCATTAACATGTTCAGTCCCGGAAATGGAAGTACAGAGACTGTCATCAACACAGCTGATGCTGATGCCACAGAAACAGCCGCTGCTGAGAAGATTAGGCGCAGAATGATAAAGAACAGAGAATCTGCTGCCAGGTCAAGAGCAAGGAAACTAGCTTACGATGCTCAACAACAAATAGAAATTGCAAAGCTGAAGAAGGAGAATGAGTTTCTGAGAAGGATTATAAGGGTTCTCTTGACTGTTATAAAGAAGAAACGAGCACAGGTTACCAAGTTATCAAGGACCTTCTCAGAGCCGCCATAA 756 0.4537 MFPVFPNSNEGKSVQLSPLSLGAHLQGAQQFQTPSSLVSDMIQPANFVLSGNWENAQESLQNWMRMKSLRNKEKTLLSIGNGSGSSQFPIHRAGNVLEPMGSAGFGVGHGGAGDGHQKELPHQVINGFSMVNPYEVNAEKQAVQGAHPYHQFINMFSPGNGSTETVINTADADATETAAAEKIRRRMIKNRESAARSRARKLAYDAQQQIEIAKLKKENEFLRRIIRVLLTVIKKKRAQVTKLSRTFSEPP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0821 251 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Vvi19g0821 251 CDD bZIP_plant_BZIP46 182 236 - -
Vvi19g0821 251 Gene3D - 180 238 - -
Vvi19g0821 251 SUPERFAMILY Leucine zipper domain 182 233 IPR046347 GO:0003700|GO:0006355
Vvi19g0821 251 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Vvi19g0821 251 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 68 226 IPR043452 GO:0003700|GO:0045893
Vvi19g0821 251 Pfam Basic region leucine zipper 182 227 IPR004827 GO:0003700|GO:0006355
Vvi19g0821 251 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0821 Vvi-Chr19 9101792 9103366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0821 179 225 bZIP Transcription Factor Family AT2G41070 57.447 1.45e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi19g0821 bZIP_2 5.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0821 K14432 - vvi:100249773 474.552