Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0747 ATGTCTCGCTCTCTCCTCACCCTCTCTCTTGGCCTCCTCGTCCTCGCAGCCGTCGCCGCAGCCCATGGCGGCCATCATGCCGATGATGATGATGATGTTGATGTTGACGCACCGTCGTCGGAGGGCGTTGACCTGAGGGCGAAGCCACTGATTCTGGTGAAGATCTACTGTCTGATTCTGGAGTTTGTCGGGACGTTCATCGCCGGCGTGTCGCCTTACTTCTTGAAGATGAATGAGACGTTTTTAGTGCTGGGAACGCAGTTCGCCGGCGGAGTGTTTCTGGGGACGGCGATGATGCATTTTCTGAGCGACTCGAATGAGACGTTCGGGGATTTGACGAGCGTGGAGTATCCGTTCGCGTTCATGCTGGCGTGTGCGGGGTATTTGATGACGATGTTCTCCGATGGTTTGATTTTCTATGTGTATGGAAAGGGGGCGAGTGGTGGTGAGGGAGATGTCGAGCTTCAAGCAAATATGCAAGGAAAAAGTAGTAGTAATGGCGGAAATTCAGAGTCTCTGGGTCAGGATCAGAATTGCACAGAGCTCCACTTTGTAAACGCCCCTCTGAGAACTGCCACATCGCTTGGGGACAACATATTACTCATCTTTGCACTGTGTTTCCACTCTGTATTTGAGGGCATTGCAATTGGAGTTGCAGAGACCGAAGCTGACGCTTGGAGAGCTCTATGGACGGTCTGTCTCCACAAGATATTTGCAGCCATTGCAATGGGAATAGCTCTCCTTCGGATGATTCCAGACAGACCCCTCCTCTCCTGTGTAGCCTATGCCTTTGCATTTGCCATTTCTAGCCCAGTTGGAGTGGCCATTGGTATCGTCATAGATGCCACTACCCAGGGCGCTGTGGCTGACTGGATATACGCTATATCAATGGGGCTAGCATGTGGGATCTTCATCTATGTCTCAATAAACCATCTACTGTCCAAGGGATACAATTGCCAGAGGACAGTTCCCTTTGACACCCCCAACTACAAGTTCTTAGCAGTGTTGTTGGGTGTCGGGGTAATCGCGGTTGTGATGATCTGGGACACCTGA 1053 0.5147 MSRSLLTLSLGLLVLAAVAAAHGGHHADDDDDVDVDAPSSEGVDLRAKPLILVKIYCLILEFVGTFIAGVSPYFLKMNETFLVLGTQFAGGVFLGTAMMHFLSDSNETFGDLTSVEYPFAFMLACAGYLMTMFSDGLIFYVYGKGASGGEGDVELQANMQGKSSSNGGNSESLGQDQNCTELHFVNAPLRTATSLGDNILLIFALCFHSVFEGIAIGVAETEADAWRALWTVCLHKIFAAIAMGIALLRMIPDRPLLSCVAYAFAFAISSPVGVAIGIVIDATTQGAVADWIYAISMGLACGIFIYVSINHLLSKGYNCQRTVPFDTPNYKFLAVLLGVGVIAVVMIWDT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0747 350 PANTHER ZINC/IRON TRANSPORTER 53 344 - -
Vvi19g0747 350 Pfam ZIP Zinc transporter 52 345 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0747 Vvi-Chr19 8223620 8239517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0747 23 350 Inorganic Solute Cotransporters AT1G55910 60.714 1.23e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0747 K14709 - vvi:100248132 604.749