Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0736 ATGGAGCTCCAATTCTCCTTCTTCCCTATCCTTTGCACCTTCCTTCTATTCATTTACCTGCTGAAGAGATTAGGAAAGCCATCCAGAACCACCCATCCCGCTCCAAATTTACCACCAGGACCATGGAAGTTGCCCATCATTGGAAACATGCACCAGCTTGTTGGTAGTCTACCCCATCACAGCCTAAGAAACTTGGCCAAGAAACATGGACCCCTGATGCACCTACAACTAGGTGAAGTTTCCGCCATTGTTGTTTCTTCAAGAGAGATGGCCAAAGAGGTAATGAAAACCCATGACATCATCTTTTCTCAAAGGCCTTGTATTCTTGCGGCAAGTATCGTATCTTATGACTGCACAGATATTGCTTTTGCCCCATATGGAGATTACTGGAGGCAAATTCGAAAAATTTCCATTTTGGAGCTTCTAAGTGCAAAGCGGGTCCAATCATTCAGATCAGTGAGGGAAGAGGAGGTGCTCAATCTTGTTAGATCAATCTCTTCACAGGAGGGAGTATCAATCAATCTTACTGAGAGTATTTTTTCTTTGACATTTAGCATCATTTCCAGGGCGGCCTTTGGTAAGAAATGCAAGGACCAAGAAGCATTCTCGGTAACTCTTGAGAAATTTGCAGGCTCAGGAGGGGGTTTCACAATTGCTGATGTGTTCCCTTCCATAAAACTACTTCATGTGGTCAGTGGAATAAGGCATAAACTTGAGAAAATTCACAAAAAACTGGACACGATACTTGAAAACATCATCAATGAACATAAAGCTAGAAGTGAAGCATCGGAGATCAGTGAGGCTGAGGTAGATGAAGATTTAGTTGATGTCCTTTTGAAAGTTCAGAAGCAGGGTGACCTTGAATTTCCCTTAACTACAGACAACATCAAAGCGATTCTCTTGGACCTCTTCATAGCTGGCAGTGAGACATCATCTACAGCTGTGGAGTGGGCCATGGCAGAAATGCTGAAAAACCCTGGAGTAATGGCGAAGGCACAAGCCGAGGTGAGAGACATTTTTAGTAGAAAAGGAAATGCTGACGAAACCATGATTCATGAATTAAAATTCTTAAAGTTGGTCATCAAAGAAACTCTGAGACTGCACCCCCCTGTTCCTTTATTAATTCCAAGAGAATCTCGAGAGAGTTGTGAAATTAATGGATATGAGATACCTGTCAAAACTAGAGTCATAATTAATGCATGGGCAGTTGCAAGAGATCCCGAACATTGGAATGATGCAGAGAGCTTCAATCCAGAGAGGTTCCTTGACAGTTCAATTGATTATCAGGGTACTAATTTTGAATACATCCCATTTGGTGCTGGAAGGAGGATGTGCCCAGGAATATTGTTTGGTATGGCCAATGTTGAGATTGCACTTGCACAATTGCTCTACTATTTTGATTGGAAACTTCCAAATGGAACACAGCATGAAGAGTTAGACATGACTGAGGATTTTAGAACCTCACTTAGAAGAAAACTGAATCTGCACTTAATTCCCATTACTTATCGTCCTTTGCCTGTTGAATAA 1527 0.4185 MELQFSFFPILCTFLLFIYLLKRLGKPSRTTHPAPNLPPGPWKLPIIGNMHQLVGSLPHHSLRNLAKKHGPLMHLQLGEVSAIVVSSREMAKEVMKTHDIIFSQRPCILAASIVSYDCTDIAFAPYGDYWRQIRKISILELLSAKRVQSFRSVREEEVLNLVRSISSQEGVSINLTESIFSLTFSIISRAAFGKKCKDQEAFSVTLEKFAGSGGGFTIADVFPSIKLLHVVSGIRHKLEKIHKKLDTILENIINEHKARSEASEISEAEVDEDLVDVLLKVQKQGDLEFPLTTDNIKAILLDLFIAGSETSSTAVEWAMAEMLKNPGVMAKAQAEVRDIFSRKGNADETMIHELKFLKLVIKETLRLHPPVPLLIPRESRESCEINGYEIPVKTRVIINAWAVARDPEHWNDAESFNPERFLDSSIDYQGTNFEYIPFGAGRRMCPGILFGMANVEIALAQLLYYFDWKLPNGTQHEELDMTEDFRTSLRRKLNLHLIPITYRPLPVE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0736 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vvi19g0736 508 PANTHER OS08G0105600 PROTEIN 60 504 - -
Vvi19g0736 508 CDD CYP71-like 68 495 - -
Vvi19g0736 508 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 Pfam Cytochrome P450 38 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 FunFam Cytochrome P450 71D8 30 499 - -
Vvi19g0736 508 Gene3D Cytochrome P450 31 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0736 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0736 Vvi-Chr19 8065226 8067199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0736 1 502 Cytochrome P450 AT1G13110 40.971 1.43e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0736 - K23806 vvi:100246293 985.711