Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0734 ATGAAGCCTAAACTTGAGAAAGTGCACCAGAAAATTGATAGGATACTTAACAATATTATTGATGACCACAGGAAGAGGAAGACAACAACAAAAGCGGGGCAACCCGAAACCCAGGAAGATCTAGTTGATGTTCTTTTAAACCTTCAGGAGCATGGGGACCTTGGAATTCCCTTAACTGACGGCAACGTCAAAGCAGTCCTATTGGACATTTTCAGTGGTGGTGGTGAGACGTCGTCAACGGCTGTGGTGTGGGCGATGGCAGAAATGCTGAAATCCCCAATAGTAATGGAAAAGGCTCAAGCTGAGGTTAGACGGGTCTTTGATGGAAAAAGGGACATCAATGAAACAGGCATTCATGAATTAAAATACTTGAATTCAGTAGTAAAAGAAACCTTGAGGCTACACCCTTCTGTTCCTTTGTTGCTTCCAAGAGAATGCAGGGAAAGGTGCGTGATTAATGGATACGAGATACCTGAAAACACTAAAGTCATCATTAATGCATGGGCAATTGCTCAAGATCCTGATCATTGGTTTGAACCCAATAAATTTTTTCCTGAGAGGTTCCTGGATAGTTCGATTGATTTCAAGGGTACTGATTTTAAATATATCCCATTTGGTGCTGGAAGGAGGATGTGCCCAGGCATTTTGTTTGCTATACCTAATGTTGAACTGCCACTTGCAAATTTGCTCTACCATTTTGACTGGAAACTTCCGGATGGAATGAAGCATGAGGATCTAGACATGACTGAGGAATTTGGGTTGACCATTAGAAGAAAAGAAGATCTGAACCTAATTCCCATTCCATATGATCCTTTTCTTGTTCTGTGA 828 0.4155 MKPKLEKVHQKIDRILNNIIDDHRKRKTTTKAGQPETQEDLVDVLLNLQEHGDLGIPLTDGNVKAVLLDIFSGGGETSSTAVVWAMAEMLKSPIVMEKAQAEVRRVFDGKRDINETGIHELKYLNSVVKETLRLHPSVPLLLPRECRERCVINGYEIPENTKVIINAWAIAQDPDHWFEPNKFFPERFLDSSIDFKGTDFKYIPFGAGRRMCPGILFAIPNVELPLANLLYHFDWKLPDGMKHEDLDMTEEFGLTIRRKEDLNLIPIPYDPFLVL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0734 275 Gene3D Cytochrome P450 1 265 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 SUPERFAMILY Cytochrome P450 4 268 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 125 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 62 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 212 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 202 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 166 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS E-class P450 group I signature 82 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS P450 superfamily signature 203 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS P450 superfamily signature 73 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 PRINTS P450 superfamily signature 126 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 FunFam Os06g0641600 protein 1 265 - -
Vvi19g0734 275 Pfam Cytochrome P450 3 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0734 275 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 205 214 IPR017972 GO:0005506|GO:0016705
Vvi19g0734 275 PANTHER OS08G0105600 PROTEIN 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0734 Vvi-Chr19 8035822 8037119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0734 4 267 Cytochrome P450 AT3G26230 47.955 7.37e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0734 - - vri:117908144 556.214