Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0710 ATGCCAGCGGTGAGCCCCGATCAATCTGATCGGGATTCAGAGCCGTTTGTGGAGGTAGATCCGACTAGAAGATATGGTCGGTACAATGAACTGCTTGGCTGTGGTGCAGTGAAGAGGGTGTACCGTGCTTTTGATCAGGAGGAGGGCATAGAGGTGGCTTGGAACCAGGTGAAATTAAGGGCTTTTAGTGATGACAAGCCAATGATTGATCGGCTTTTCTCTGAAGTTCGATTGCTCAAGACTCTTAAGGACAAGAACATCATTGCTCTGTACAATGTGTGGCGAAATGAGGATCATAACACCTTGAATTTCATAACTGAAGTGTGTACATCTGGTAATTTGAGGGAGTATCGGAAGAAGCATAGACATGTTTCCATGAAGGCACTGAAGAAATGGTCAAAGCAGATTTTGAAGGGTTTAGACTATTTGCATAGGCATGAACCCTGTATTATTCATAGGGATCTCAACTGCAGTAATGTCTTCATCAATGGCAATGTGGGTAAGGTGAAGATCGGTGATTTTGGATTGGCAGCAACAGTGGGGAAGAGCCATGTAGCACATTCAGTGCTTGGAACACCAGAATTCATGGCTCCAGAGCTATATGAAGAGGACTACACAGAACTAGTAGACATATACTCATTTGGTATGTGCTTTCTAGAGATGGTCACATTAGAAATCCCATACAGCGAATGTGACAACATCGCCAAAATATACAAAAAGGTGATATCTGGGGCTAGACCTCGGGCCATGGACAAGGTCAGGGACCCTGAGGTGAAGGCATTCATCGAAAAGTGCCTGGCAAAGCCAAGGGCAAGACCCTCAGCTTCAGAGCTCCTCAATGACCCATTTTTCCATGGAATTGATGATGACGAAATTGACAACAGTGATAGTTAG 894 0.4485 MPAVSPDQSDRDSEPFVEVDPTRRYGRYNELLGCGAVKRVYRAFDQEEGIEVAWNQVKLRAFSDDKPMIDRLFSEVRLLKTLKDKNIIALYNVWRNEDHNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILKGLDYLHRHEPCIIHRDLNCSNVFINGNVGKVKIGDFGLAATVGKSHVAHSVLGTPEFMAPELYEEDYTELVDIYSFGMCFLEMVTLEIPYSECDNIAKIYKKVISGARPRAMDKVRDPEVKAFIEKCLAKPRARPSASELLNDPFFHGIDDDEIDNSDS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0710 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 285 - -
Vvi19g0710 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Vvi19g0710 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g0710 297 MobiDBLite consensus disorder prediction 271 297 - -
Vvi19g0710 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Vvi19g0710 297 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g0710 297 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Vvi19g0710 297 PIRSF TyrPK_CSF1-R 118 281 - -
Vvi19g0710 297 PIRSF TyrPK_CSF1-R 23 131 - -
Vvi19g0710 297 CDD STKc_WNK 24 284 - -
Vvi19g0710 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Vvi19g0710 297 SUPERFAMILY Protein kinase-like (PK-like) 15 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0710 Vvi-Chr19 7730105 7731400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0710 8 287 MAP Kinase Kinase Kinase AT5G55560 79.286 7.90e-176 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vvi19g0710 Pkinase 4.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0710 K08867 - vvi:100257136 611.298