Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0695 ATGCCTGAAACACAGATTTCCAATGGGTTCAGTGAGCCTCGCCTTGTGGTGAGAAAATTCTTGGCTAGGCCTCAGCATGAAGGAGCTGGAGCCATTGTCAGGAGAAGCATAGGAAGGTTTGAGCTGAAATACTTCGATCCTTTTCTTGTTTTGGATGAATTCTCAGTTTCTGCTCCTGCTGGGTTTCCTGATCACCCCCACAGAGGTTTTGAGACAGTTACCTACATGTTACAGGGAGCTGTTCAACATGAAGATTTTGAAGGGCACAAGGGGTCAATAGAGGCAGGTGATTTACAGTGGATGACCGCAGGAAGAGGGATCGTTCACTCAGAAATGCCTGCAGCCACCGGTGTCCAAAAGGGTCTGCAGTTGTGGATCAACCTCTCCTCCAAAAATAAGATGATCGAGCCGAGGTACCAAGAAATAGAGAGTAAGAACATCGCAGAAGCTACAAAAGACGGGATCAAGGTGAGGGTCATAGCAGGGGAGGCCTTGGGGAAAAAATCACCAGTATACACAAAGACCCCCACCATGTATCTGGACTTCACTCTGAGTCCAGGAGCTCAGCTGCAGCAGCCCATACCCATAAAATGGAACGCGTTTGTGTATGTCTTGGAAGGTGAAGGGGTGTTTGGGAACCCAAAAAATCTTCCCACAACAGCCCACCACCTGCTCCTTCTAGGCTCAGGTGATGGGCTGGAAGCATGGAACAAGTCCCTGAAGCCCCTCAGATTCGTTTTGGTTGGGGGTGAGCCCTTGGGGGAGCCTGTGGTGCAGTTAGGCCCCTTTGTGATGAACACCCAGGAAGAGATTGACAGAACAATTGAGGATTATGAAAACTGCATCAATGGATTTGAGAAGGCTAAATACTGGAGGTCTGAAGTTCTTCGTTTCTAG 897 0.4883 MPETQISNGFSEPRLVVRKFLARPQHEGAGAIVRRSIGRFELKYFDPFLVLDEFSVSAPAGFPDHPHRGFETVTYMLQGAVQHEDFEGHKGSIEAGDLQWMTAGRGIVHSEMPAATGVQKGLQLWINLSSKNKMIEPRYQEIESKNIAEATKDGIKVRVIAGEALGKKSPVYTKTPTMYLDFTLSPGAQLQQPIPIKWNAFVYVLEGEGVFGNPKNLPTTAHHLLLLGSGDGLEAWNKSLKPLRFVLVGGEPLGEPVVQLGPFVMNTQEEIDRTIEDYENCINGFEKAKYWRSEVLRF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0695 298 PIRSF Pirin 12 292 IPR012093 -
Vvi19g0695 298 CDD cupin_pirin_C 176 252 - -
Vvi19g0695 298 PANTHER PIRIN-RELATED 8 294 IPR012093 -
Vvi19g0695 298 FunFam pirin 27 164 - -
Vvi19g0695 298 Pfam Pirin 34 126 IPR003829 -
Vvi19g0695 298 Gene3D Jelly Rolls 148 253 IPR014710 -
Vvi19g0695 298 Pfam Pirin C-terminal cupin domain 179 281 IPR008778 -
Vvi19g0695 298 CDD cupin_pirin_N 33 128 - -
Vvi19g0695 298 SUPERFAMILY RmlC-like cupins 14 294 IPR011051 -
Vvi19g0695 298 Gene3D Jelly Rolls 27 279 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0695 Vvi-Chr19 7622543 7624270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0695 11 289 Calmodulin-binding Proteins AT3G59220 58.363 1.65e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0695 K06911 - vvi:100241784 603.208