Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0675 ATGGCTTCTTCAGACTCGTGGATGAAAGAATATAATGATGCAGTTAAACTTGCTGATGATATCAATGGAATGATTTCTGAAAGGATTTCATTTTCTGCACCGGGAGTTGATGCCCAACGTCATGCATCTGCGATCCGAAGAAAGATTACAATATTAGGGACTAGACTTGACAGCTTACAGTCCCTTTTGTCAAAGCTTCCTGGAAAGCAGCCCTTAACTGAGAAAGAGATGAATCGACGCAAAGACATGGTTGCAAATTTGAAATCAAAAGCAAACCAGATGGCATCAACATTGAACATGTCAAACTTTGCAAACAGAGACAGCTTGCTTGGCCCAGAGATAAAGCCTGCTGATGCCATGAACAGAACAACAGGTTTGGACAACTATGGCCTTGTGGGCCTTCAGCGGCAAATTATGAAAGAACAAGATGAGGGACTTGAGAAATTGGAAGAGACAGTATATAGTACAAAACATATTGCATTGGCAGTCAACGAAGAGCTTGACCTACATACTAGACTTATTGATAACTTGGACCAACATGTGGATATTACAGACTCTCGTCTAAAGCGAGTGCAGAAGAATCTGGCAATTTTGAACAAGCGCACCAAGGGTGGCTGCTCCTGCCTGTGCCTGCTCTTATCAGTTGTTGGCATTGTGATTCTGATTGTTGCGATATGGTTGCTGGTTAAATACTTGTGA 699 0.422 MASSDSWMKEYNDAVKLADDINGMISERISFSAPGVDAQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPLTEKEMNRRKDMVANLKSKANQMASTLNMSNFANRDSLLGPEIKPADAMNRTTGLDNYGLVGLQRQIMKEQDEGLEKLEETVYSTKHIALAVNEELDLHTRLIDNLDQHVDITDSRLKRVQKNLAILNKRTKGGCSCLCLLLSVVGIVILIVAIWLLVKYL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0675 232 CDD SNARE_Qc 139 196 - -
Vvi19g0675 232 PANTHER SYNTAXIN 39 219 IPR045242 -
Vvi19g0675 232 FunFam syntaxin-51 isoform X2 138 200 - -
Vvi19g0675 232 Gene3D - 138 200 - -
Vvi19g0675 232 SMART tSNARE_6 131 198 IPR000727 -
Vvi19g0675 232 Pfam SNARE domain 173 223 IPR000727 -
Vvi19g0675 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Vvi19g0675 232 SUPERFAMILY SNARE fusion complex 127 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0675 2 232 SNARE and Associated Proteins AT1G16240 71.861 1.48e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0675 K08503 - vvi:100250369 412.535