Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0662 ATGATGTATAAGGTCATGGCTTGGCTCTTCTTAGCTCAGCTCCTGATCCAAATCCTAAGGATCCATGCAAAAGTTCCAGCCATTATTGTTTTTGGGGACTCCTCTGTGGACTCAGGGAACAACAACCAGGTACAAACAATTCTAAAGAGCAATTTTGAGCCTTATGGGCGTGATTTCAATGGTGGCCAACCCACTGGACGGTTTTCTAATGGTCGGCTTCCACCAGACTTCATTTCTGAGGCTTTTGGGGTCAAGCCAGTGGTACCTGCTTACTTGGATCCCACTTATCATATTACAGATTTTGCCACTGGAGTTTGCTTTGCTTCTGCTGGAACTGGTTATGATAATGCTACCTCCAACGTGCTGTCAGTGATACCTTTCTGGAAGGAACTTGAATACTACAAGGAATACCAGAAGCAGCTCAGAGATTATCTTGGCCATCAGAAAGCTAATGAGGTTCTGAGTGAATCACTGTATTTAATAAGCTTAGGAACCAATGATTTCTTAGAAAACTACTACCTACTTCCAGGCAGGCGGTTAAAGTTCTCTGTTGAGGAGTACCAGAGTTTTCTTGTAGGGATTGCTGGAAATTTCATTACAGAGCTCTTCCAATTAGGAGCTAGAAAGATCTCACTGGGTGGTCTTCCTCCTATGGGTTGTTTGCCACTGGAAAGAACCACAAATATTTTATCTGGGAGGGATTGTGTGGAGAAGTACAATATTGTGGCCTGGGATTTCAATGGGAAGTTGCAAGAACTGGTTATGAAGCTGAAAAATGAGCTTTCTGGAATCAGATTGGTGCTAACAAACCCATTTGATATTCTCTTGGAGATTATTCAGAGTCCACACTCTTTTGGATTCGAGGAAGCAGCAGTAGCATGTTGCGCAACTGGAGTGGTTGAAATGGGGTACATGTGTAATAAATTTAACCCACTCACATGTGCAGATGCGGATAAATATGTATTTTGGGATGCTTTCCACCCAACGGAGAAAACCAACAGGATTATTGCTGATCATGTGGTTAAGCATTCCCTAGCAGAGTTCATATGA 1050 0.4276 MMYKVMAWLFLAQLLIQILRIHAKVPAIIVFGDSSVDSGNNNQVQTILKSNFEPYGRDFNGGQPTGRFSNGRLPPDFISEAFGVKPVVPAYLDPTYHITDFATGVCFASAGTGYDNATSNVLSVIPFWKELEYYKEYQKQLRDYLGHQKANEVLSESLYLISLGTNDFLENYYLLPGRRLKFSVEEYQSFLVGIAGNFITELFQLGARKISLGGLPPMGCLPLERTTNILSGRDCVEKYNIVAWDFNGKLQELVMKLKNELSGIRLVLTNPFDILLEIIQSPHSFGFEEAAVACCATGVVEMGYMCNKFNPLTCADADKYVFWDAFHPTEKTNRIIADHVVKHSLAEFI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0662 349 PANTHER GDSL ESTERASE/LIPASE EXL3 14 340 - -
Vvi19g0662 349 CDD SGNH_plant_lipase_like 26 340 IPR035669 -
Vvi19g0662 349 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
Vvi19g0662 349 Gene3D SGNH hydrolase 17 345 IPR036514 -
Vvi19g0662 349 SUPERFAMILY SGNH hydrolase 28 342 - -
Vvi19g0662 349 FunFam GDSL esterase/lipase APG 19 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0662 Vvi-Chr19 7223423 7225718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0662 11 342 Pollen Coat Proteome AT1G75910 33.531 1.02e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0662 - - vvi:100260574 707.983