Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0594 ATGGTTGAACTTGATCTCCAGATTCCATCTGCTTTTGATCCATTTGCTGAGGCCAAGGACTCAGGCGCGCCTGGGGCAAAAGAGTATGTACACATTCGTATACAGCAGAGGAATGGAAAGAAGAGCCTGACTACTGTCCAAGGACTGAAGAAGGATTACAGTTACGAGAAGATCCTCAAGGATCTCAAGAAGGAGTTCTGCTGCAATGGGAATGTTGTGCAGGACAAAGAGCTTGGCAAGGTTATTCAACTGCAAGGTGATCAGCGAAAGAACGTGTCCAATTTTCTCGTCCAGGCTGGGCTTGTGAAGAAGGAGCAGATCAAGATACATGGTTTTTGA 339 0.4631 MVELDLQIPSAFDPFAEAKDSGAPGAKEYVHIRIQQRNGKKSLTTVQGLKKDYSYEKILKDLKKEFCCNGNVVQDKELGKVIQLQGDQRKNVSNFLVQAGLVKKEQIKIHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0594 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Vvi19g0594 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Vvi19g0594 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Vvi19g0594 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Vvi19g0594 112 Gene3D - 2 112 - -
Vvi19g0594 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Vvi19g0594 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Vvi19g0594 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Vvi19g0594 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0594 Vvi-Chr19 6580207 6580826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0594 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 86.607 1.71e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0594 K03113 - vvi:100243506 226.098