Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0586 ATGAGTGTTGTGGGGTTTGATATTGGAAATGAGAATTGTGTGATCAGTGTTGTGAAGCAGCGAGGGATAGATGTTTTGTTGAATGATGAATCAAAACGTGAAACCCCATCAGTGGTATGTTTCGGGGAGAAGCAGCGAATTTTGGGGTCTGCCGGAGCTGCTTCAGCTACCATGAACCCTAGATCCACAATCTTTCAGGTGAAGAGACTGATTGGTCTGAATTTTTCGGAACCACACATTAAGGATGAGTTAAAGATGTTTCCTTTTGAGACTTCTGAAGGCCCAGATGGTGGCATTTTGATACATTTGCAATACTTGGGTGAGCGGCATACCTTTACACCAGTTCAGATATTGGCAATGCTTTTTGCGCATCTGAAAGATATAACAGAGAAAAATTTAGAATTTCCCATATTGGATTGCGTGATTGGAATTCCATCATACTTCACAGACTTGCAGAGACGTGCTTATTTATATGCTGCGGAAATTGCTGGATTGAAGCCTTTGAGACTGCTACATGACTGTACTGCTACTGCTTTAGGTTATGGGATTTACAAAACAGACTTCTCCAGTGCAGGTCCAACTTATATTGTTTTTGTTGATATTGGCCATTGTGATACCCAGGTTTCTATTGCATCCTTTGAGGCTGGCTATATGAAGATACTTTCACATGCTTATGACAGAAGTTTGGGAAGCAGAGACTTTGACGAGGTTTTGTTTAAATATTTTGCAGCACAATTTAAGGAGCAATACAACATTGATGTGTATTCTAATGTCAGGGCATCTGTTAGACTACGAGTGGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATGCAGAAGCACCTCTCAATATTGAGTGTTTGATGGATGAGAAAGACGTTAAGGGTTTTATTAAAAGGGAGGAATTTGAGAATCTGGCTTCAGGATTATTTGAGAGGATTCGTGTTCCTTGTAATCAAGCTCTATCTGATGCAAGGTTGACTGTGGACAAGATCCATGCTGTTGAGCTTGTCGGATCAGGGTCTAGGATCCCAGCTATTTCTAGACTGCTAGCTTCTTTATTCCGGAGAGAACCCAGAAGAACGCTGAATGTAAGTGAATGTGTGGCACGTGGATGTGCTCTTCAGTGTGCTATGCTTAGTCCTATTTTCCGGGTCAGAGATTACGAGGTTCAAGATTCTTTGCCTTTCTCCATAGGATTCTCATCAGATGAAGTCCCAATTTGCACGATGACAAATAGCATACTGTTTCCAAAAGGCCAACCCATTCCAAGTGCTAAAATTCTGACATTTCAACGAAGTAGTCTGTTCCACTTGGAAGCATTCTATGCCAATCCAAATGAATTGCCTGCTGGCATGCCTTCAAAAATTGGTTGTTTTACGATTGGGCCTTTTCAAGCTTCTCATGGTGCTAAGGTAAAGGTTAAAGTTCATTTAAACGTCCATGGGATTGTCACTGTTGAGTCAGCCTCGTTGATAGAAGATCATGAAGATGATTCAGTTACTAGGGATCATGCACAATTGAACTCGGACAAAATGGAGGCTGAGTCTGTTTCTGGTTCTGGTTCTTCTGTGGCAGTGGAAAATGGTGTTGAGGATGGTACCTCTACTCAGTCAAAATCTTCACAGACCACTTCTGCTGGTGGTGTGAGAAAGCATAAATCAACTAGGAGGCATGAGATACCAGTAAGTGAGAACATATATGGGGGAATGACCGAGGCTGAGCTTTCAGAAGCACAAGAGAAAGAAATTCAGCTGACACAACAGGACAGAACTGTGGAGCAGACCAAAGAGAAGAAGAATGCCCTGGAGTCTTACGTCTATGACATGCGGAATAAGCTTTTCCACACCTATCGGAGCTTTGCAAGCGATCAAGAGAGAGAGGGCATCTCCAGAAGCCTACAGCAGACAGAGGACTGGCTTTACGAGGATGGTGATGATGAAACTGAAAATGCTTATAGCTCTAGACTGGAGGATCTTAAGATGCTGGTGGATCCTATTGAGAATCGATATAAAGATGAAGAGGCAAGGGCACAGGCTACAAGGGATCTGTTGAACTGTATTGTGGAACATCGGATGTCTGTGGGCTCACTCCCACCTAACGACGGAGAGCAAATCCTTAATGAATGCAACAAAGCTGAGCAGTGGCTGAGAGAGAGAACCCAGCAACAAGAGTCATTGTCTAAGAACACTGACCCAGTACTGTGGTCAAGCGATATCAAGAAGATGACTGAGGATTTGGACTTGAAATGCAAAAATATACTGGGTTCCAGGACTTCTCCAAATCCAGAGGACCACAAGGGCACAGGCCCATGA 2316 0.4305 MSVVGFDIGNENCVISVVKQRGIDVLLNDESKRETPSVVCFGEKQRILGSAGAASATMNPRSTIFQVKRLIGLNFSEPHIKDELKMFPFETSEGPDGGILIHLQYLGERHTFTPVQILAMLFAHLKDITEKNLEFPILDCVIGIPSYFTDLQRRAYLYAAEIAGLKPLRLLHDCTATALGYGIYKTDFSSAGPTYIVFVDIGHCDTQVSIASFEAGYMKILSHAYDRSLGSRDFDEVLFKYFAAQFKEQYNIDVYSNVRASVRLRVACEKLKKVLSANAEAPLNIECLMDEKDVKGFIKREEFENLASGLFERIRVPCNQALSDARLTVDKIHAVELVGSGSRIPAISRLLASLFRREPRRTLNVSECVARGCALQCAMLSPIFRVRDYEVQDSLPFSIGFSSDEVPICTMTNSILFPKGQPIPSAKILTFQRSSLFHLEAFYANPNELPAGMPSKIGCFTIGPFQASHGAKVKVKVHLNVHGIVTVESASLIEDHEDDSVTRDHAQLNSDKMEAESVSGSGSSVAVENGVEDGTSTQSKSSQTTSAGGVRKHKSTRRHEIPVSENIYGGMTEAELSEAQEKEIQLTQQDRTVEQTKEKKNALESYVYDMRNKLFHTYRSFASDQEREGISRSLQQTEDWLYEDGDDETENAYSSRLEDLKMLVDPIENRYKDEEARAQATRDLLNCIVEHRMSVGSLPPNDGEQILNECNKAEQWLRERTQQQESLSKNTDPVLWSSDIKKMTEDLDLKCKNILGSRTSPNPEDHKGTGP* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0586 771 Gene3D - 186 360 - -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 4 571 681 - -
Vvi19g0586 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Vvi19g0586 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Vvi19g0586 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Vvi19g0586 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Vvi19g0586 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 4 112 192 - -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 16 isoform A 387 569 - -
Vvi19g0586 771 SUPERFAMILY Actin-like ATPase domain 193 380 IPR043129 -
Vvi19g0586 771 Gene3D - 571 682 IPR029048 -
Vvi19g0586 771 Gene3D - 38 113 - -
Vvi19g0586 771 Pfam Hsp70 protein 3 671 IPR013126 GO:0005524|GO:0140662
Vvi19g0586 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 573 671 IPR029048 -
Vvi19g0586 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 762 - -
Vvi19g0586 771 MobiDBLite consensus disorder prediction 496 511 - -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 4 230 313 - -
Vvi19g0586 771 MobiDBLite consensus disorder prediction 512 550 - -
Vvi19g0586 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Vvi19g0586 771 CDD HSPA4_like_NDB 2 381 - -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 4 1 73 - -
Vvi19g0586 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 569 IPR029047 -
Vvi19g0586 771 FunFam Heat shock 70 kDa protein 4 38 113 - -
Vvi19g0586 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 604 IPR029047 -
Vvi19g0586 771 Coils Coil 579 599 - -
Vvi19g0586 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Vvi19g0586 771 Gene3D - 5 374 - -
Vvi19g0586 771 MobiDBLite consensus disorder prediction 496 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0586 Vvi-Chr19 6485009 6495310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0586 4 431 Calmodulin-binding Proteins AT1G16030 33.411 5.69e-78 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0586 K09489 - vvi:100250433 1519.21