Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0578 ATGGCTGAAGATATTGTGACCTCTGTTGCCTCTCTGATTCGAGAGGGCTTGTTGGAGCCAATTGGACGTCAGCTTTATTATCTTGTTCAGTTCAACAAAAATGTTCAGGACTTAAGGGAGCAAGTTGACAAGTTAGAGAGTGTGAAATATAAGGTACAACTATCCATTGATACAGCACAAAGAAAGGGGGAACATATAAAACTGGAGGCTGAGAAGTGGCTAACGAATGTGGAAAAGGTCACTGAAGATGCAAGGAAGTTGGAAGACAATGTAAAGAAGAGGTGCTTTAATGGGTGGTGCCCTGATTGGAGTTCTCGTTGCTGGTTGAGCAAGGAACTGTCTAGGAAGTCTATCATCATTTCTGAGCTCCATGAAGATGGAAATTTTAGTGAAGTATCATACCCTGCTCCTTCTCCAGGGATAGAGTCCTTACCCTCTGGAGATTTCCAAACTTTTGAATCAACAAAGTCAGCCATGAATCAAATCATTGAATTATTGAAGTGTGATGACAGCCATACTGTATGTGTATATGGTATGGGAGGCATAGGCAAAACAACCTTGGTGAAAGAAGTTGGCAAGAAGACCAAAGAAGAAAAGCTTTTTGATGAAGTTGTAACTGCAGTTGTTTCTCAGGCTCCAGACTTAATAAAGATTCAAGGAGAAATAGCAGACACATTGGGTCTGGAATTCAAAAGAAAGACAGTAACTGGAAGAGCAAGTCAGCTTTGTGAAAGACTAAAGATGGAGAAGAGGATCCTAATAATCTTGGATGATGTCTGGAAGATACTTGACTTGGCAGCCATAGGAATTCCCCATGGGGTTGATCACAAGGGATGCAAAATTCTTCTCACTACACGTCTTGAACATGTATGTAATGTAATGGGAGGCCAAGCGACAAAGCTTCTTTTAAATATCTTAGATGAACAAGAATCATGGGCCTTGTTTAGATCAAATGCTGGTGCGATTGTTGATTCCCCTGCTGTTGATGCTGTGGCAATGGAAGTTGCTAAGAAGTGTGGGGGATTGCCCCTAACACTAGTAACAGTTGGAAAGGCTCTAATTGATAAAGACCTAGATGGATGGCAAGAAGCAGCCAAGCAACTTCAGGAGCATAAACCTATGAACATCCAAGACATGGATGCAAACATTTTTTCTTGTCTGAAGCTCAGTTTTGATCATCTCCAAGGAGAGGAAATCACCTTGATCTTCTTGCTATGCTGTCTATTTCCAGCAGATTGTGATATTGAAGTGGAGTATTTAACAAGGCTTGGAATGGGGCAGAGATGCTTTAAGGACATTGCAACAGTAGATGAAGCAAGGAGACGGGTACGTACACTGATCAATGGCCTTAAATCCTCTAGTCTATTAATGGAGAGTGATAAATGTCAAGGGTGTGTGAAAATTCATGATCTTGTCCGGGCCTTTGCCATATCAATCACATGTGCAGACCAGTACCGATTCATGGTAAAATCAAGGGATGGATTGAAGAATTGGCCAAAGAAAGACACGTTTGAACATTATGCAGTGATCTCATTGATGGCCAACTACATTTCTAGTCTTCCTGTTGGGTTGGAATGTCCAAGACTTCATACTTTATTGCTGGGGAGCAACCAGGGCTTAAAAATTTTTCCTGATGCTTTCTTTGAGGGGATGAAAGCACTTAGGGTTCTGGATGTAGGTGGAGTTCGTGAAATATTTTACAATCATTCTCTTCATGTCACACCACTACCAACATCAATCCAACTCCTTGCAGACCTCAGGATGCTTCACCTTCATCATCGTAAGTTAGGTGACATATCTGTACTTGGAAAGCTAAAGAAACTTGAGATCCTTAGCCTTTTTGCTTCATGTATCAAAGAGTTGCCGAAGGAAATTGGAGAACTGAAGAGTCTAAGGTTGTTGGATCTTACCTACTGTCGATCACTAAAGAAAATTCCACCAAACTTGATATCAGGTCTATCAGGATTGGAAGAACTATACATGAGAGGAAGCTTTCAACAATGGGATGTTTGTGGAGCAACCAAGGAGAGAAGGAATGTGTGCTTAACTGAGCTTAAATCACTACCCTACTTGACCATTTTGCATGTTGAGATATTCAGTTCCAAGTGTCTTCCAAAAGACTTCCTATTGCCAACTTTGTCGCGGTTTCAAATATACATAGGCTCCAAGTTATCTTTCACAATATTCACAAAGAAGTTGAAATATGATTATCCAACTTCAAGAACCCTGGAACTTAAAGGCATTGATAGCCCCATACCAGTTGGGGTTAAGGAATTGTTTGAGAGAACAGAGGATCTGTCTTTGATCAGCTTGGAAGAAGGTTCTCGCAATATTCTCCCCCACTTGGGTTCCGAGGGTTTTAATGGATTGGTGTCTTTGAGTGTTAGGCACTGTCATGAGTTTGAATGCATCACCAATACAGTGCAAGGAGTTCAGGTAGTTGCATTCCCTAATTTGGAAACATTGCATCTAACCCAACTCAGTTGCCTGAGAGTGGTCTACATTGGCATCCTTCCAAGGGGGTCCTTCAGAAAATTAAGAGCCCTAACCGTGGAACACTGTGACAGATTGTCCACTCTCTTTCCAGCCGATCTGCTGCAAATGTTACAGAACGTGGAAAGAGTGAGAATCAGTTGGTGTCAGGAAATGCAAGAGGTATTTCAACTTGGGGGCATTTTGATAGGGGAAGAATGTGTCATGCCACTCTCTTCTTTAAGAGTATTGCAACTGAATGCCTTGCCTCAACTGGGGTATGTATGGAAGGGGTTCGATCCCCATTTAAGTCTCCATAACCTTGAAGTTCTTGAAATTCAAAGCTGTAACAGATTAAGAAATCTCTTTCAACCCTCCATGGCTCTGAGCTTGTCCAAACTGGAATACTTCAAGATATTAGACTGCACAGAGCTGGAGCAAATTGTAGCAGACGAGGATGAGTTGGAACATGAACTGTCAAACATTCAGGTTGAGAAACCTTTTCTCGCTCTCCCAAAGCTGAAAGTTCTAAAAGTAAAAGGTTGCAAGAAATTGAAGAGTCTCTTTTCAGTTAGCACTGCCCAAAGCTTTCTGCAACTAAAACAAGTCAAAGTAAGTGGGTGTAAAGAACTAAAGGAAATTGTAAGCTGTAAGGAAGGAGAATTATCAGGAGTGGACAAGATTGTGCTCCCTCAGTTAAGCAGTCTGAAGCTAAAATCTCTACCAGTGCTCGAGAGCTTCTGTATGGGGAACATTCCATTTGAATGGCCATCACTTGAAAAAATGGTCCTGAAGAAATGCCCCAAAATGACCACTTTTTCTGTAGCTGCTTCTGATGTAGTAAATCACACCCCTAAATTAAAGAAGATCCGGGTTGATGGTAAAATGATTGACAACCATACTGATCTGAATATGGCCATCAATCACCTCTTTAAAGGAAAGGAAATGGAGTTGGATGTGAAAGCTACCCCAAGTGAGATTGTTGTGGATTCCTAG 3468 0.4146 MAEDIVTSVASLIREGLLEPIGRQLYYLVQFNKNVQDLREQVDKLESVKYKVQLSIDTAQRKGEHIKLEAEKWLTNVEKVTEDARKLEDNVKKRCFNGWCPDWSSRCWLSKELSRKSIIISELHEDGNFSEVSYPAPSPGIESLPSGDFQTFESTKSAMNQIIELLKCDDSHTVCVYGMGGIGKTTLVKEVGKKTKEEKLFDEVVTAVVSQAPDLIKIQGEIADTLGLEFKRKTVTGRASQLCERLKMEKRILIILDDVWKILDLAAIGIPHGVDHKGCKILLTTRLEHVCNVMGGQATKLLLNILDEQESWALFRSNAGAIVDSPAVDAVAMEVAKKCGGLPLTLVTVGKALIDKDLDGWQEAAKQLQEHKPMNIQDMDANIFSCLKLSFDHLQGEEITLIFLLCCLFPADCDIEVEYLTRLGMGQRCFKDIATVDEARRRVRTLINGLKSSSLLMESDKCQGCVKIHDLVRAFAISITCADQYRFMVKSRDGLKNWPKKDTFEHYAVISLMANYISSLPVGLECPRLHTLLLGSNQGLKIFPDAFFEGMKALRVLDVGGVREIFYNHSLHVTPLPTSIQLLADLRMLHLHHRKLGDISVLGKLKKLEILSLFASCIKELPKEIGELKSLRLLDLTYCRSLKKIPPNLISGLSGLEELYMRGSFQQWDVCGATKERRNVCLTELKSLPYLTILHVEIFSSKCLPKDFLLPTLSRFQIYIGSKLSFTIFTKKLKYDYPTSRTLELKGIDSPIPVGVKELFERTEDLSLISLEEGSRNILPHLGSEGFNGLVSLSVRHCHEFECITNTVQGVQVVAFPNLETLHLTQLSCLRVVYIGILPRGSFRKLRALTVEHCDRLSTLFPADLLQMLQNVERVRISWCQEMQEVFQLGGILIGEECVMPLSSLRVLQLNALPQLGYVWKGFDPHLSLHNLEVLEIQSCNRLRNLFQPSMALSLSKLEYFKILDCTELEQIVADEDELEHELSNIQVEKPFLALPKLKVLKVKGCKKLKSLFSVSTAQSFLQLKQVKVSGCKELKEIVSCKEGELSGVDKIVLPQLSSLKLKSLPVLESFCMGNIPFEWPSLEKMVLKKCPKMTTFSVAASDVVNHTPKLKKIRVDGKMIDNHTDLNMAINHLFKGKEMELDVKATPSEIVVDS* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0578 1155 Gene3D - 306 390 IPR042197 -
Vvi19g0578 1155 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 991 1112 - -
Vvi19g0578 1155 Gene3D - 142 304 IPR027417 -
Vvi19g0578 1155 Gene3D Ribonuclease Inhibitor 478 734 IPR032675 -
Vvi19g0578 1155 Gene3D - 391 477 IPR036388 -
Vvi19g0578 1155 Coils Coil 28 48 - -
Vvi19g0578 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 399 IPR027417 -
Vvi19g0578 1155 Pfam NB-ARC domain 157 392 IPR002182 GO:0043531
Vvi19g0578 1155 SUPERFAMILY L domain-like 468 1041 - -
Vvi19g0578 1155 Coils Coil 70 90 - -
Vvi19g0578 1155 Gene3D Ribonuclease Inhibitor 765 953 IPR032675 -
Vvi19g0578 1155 Gene3D Ribonuclease Inhibitor 985 1128 IPR032675 -
Vvi19g0578 1155 PRINTS Disease resistance protein signature 173 188 - -
Vvi19g0578 1155 PRINTS Disease resistance protein signature 626 642 - -
Vvi19g0578 1155 PRINTS Disease resistance protein signature 246 260 - -
Vvi19g0578 1155 PRINTS Disease resistance protein signature 339 353 - -
Vvi19g0578 1155 FunFam Probable disease resistance protein At1g61300 145 299 - -
Vvi19g0578 1155 Coils Coil 969 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0578 Vvi-Chr19 6359412 6362990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0578 170 649 WRKY Transcription Factor Family AT5G45050 25.271 4.00e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0578 - - vvi:104877588 2251.09