Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0570 ATGAGTGCCTTCTTCACAATCTTCTTGGTCCTCCTCCCCATCTTCCTTCTCCTGGCCAGGAGAAGGAGTTTACCAAAAGGGGTCCCTCCAGGTTCACTAGGACTGCCCTTAATAGGCCAAAGCATTGGCCTTCTCCGTGCCATGCGAGCCAACACTGCTGAAAAATGGCTTGAAGAGAGGATAAAGAAGTATGGTCCAATTTCAAAGTTGAGCCTCTTTGGCCAATCAGCTGTCTTTATTTATGGACAGGCTGCAAACAAGCTCGTATTCGCCAGTGATGGCAGCACGATCAGTAACCAGCAAGCAAAGTCTAATCAGATGATAATGGGTGATCGGAATTTGCTGGAGCTTAGTGGAGAAGATCATAAGCGTGTCAGGGGTGCTATTGTATCATTCTTAAAGCCAGAATCCTTGAAGCAGTATGTGGGAAAGATGGATGCAGAGGTTAGGAAGCATCTTGAGATGCATTGGCAAGGCAAGCAAAGGGTCACGGTAATGCCCCTGATGAAGACCCTCACCTTCAACATTATTTGTGGCCTTCTATTTGGGGTTGAGCGAGGAATCCGAAGGGAGAAACTTGTGGGCAGATTCCAGGAAATGATAGAAGGAATTTGGTCAGTTCCGGTTAACTTGCCCTTCACCCGCTACAACCGCAGTCTTCAGGCAAGCACAAAGATCCAAAACATGATAAAGGAACTCATGCGAGAAAAGGAGGTAGAACTTGAGAAGGGTGCGTCTCCTCATCAAGATCTCATCACCTGCTTGCTCAGCATTCATGGCAAAAACAATGAAGAAGTAATTACAGAGAAGGAGATTGTGGATAATGTCATGCTTGTCATGGTTGCCGGGCACGACACTTCTGCTGTTTTGATTACTTTCTTGGTGCGGCTTCTGGCTAATGATCCAGATGTCTATGCGGCTGTTCTGAAAGAACATGAGGAGATAGCAAAAGGCAAGCCCTCAGGGGAGTTCCTAACATGGGAAGACCTGGCAAAGATGAAGTACACATGGAGAGTGGCACTGGAAACTCTGAGGATGGTTCCTCCGGTCTTTGCTGGGTTCAGGACTGTATTGAAAGACATTGAGTTTGGAGGATATCTTATCCCTGAAGGGTGGAAGATATTCTGGGCGACAAATATGACACACATGGACAATAGCATATTCCCGGAGCCAACAAAGTTTGATCCAACAAGATTTGAAAACCAAGCATCAATTCCACCGTACTGCTTCATTCCATTTGGAGGGGGCCCTCGGATATGTCCAGGAATTGAGTTTGCAAGGATTGAAACCCTTGTTACCGTCCATCATCTGGTTACTCGGTTCAAGTGGAAGTTATGCCATACCGACAATTTTTTCGGCAGGAACCCGACGCCAGCACCAACTGGAGGACTACCTATTGAGATTACATCAATGAACCTAATGTAG 1425 0.4653 MSAFFTIFLVLLPIFLLLARRRSLPKGVPPGSLGLPLIGQSIGLLRAMRANTAEKWLEERIKKYGPISKLSLFGQSAVFIYGQAANKLVFASDGSTISNQQAKSNQMIMGDRNLLELSGEDHKRVRGAIVSFLKPESLKQYVGKMDAEVRKHLEMHWQGKQRVTVMPLMKTLTFNIICGLLFGVERGIRREKLVGRFQEMIEGIWSVPVNLPFTRYNRSLQASTKIQNMIKELMREKEVELEKGASPHQDLITCLLSIHGKNNEEVITEKEIVDNVMLVMVAGHDTSAVLITFLVRLLANDPDVYAAVLKEHEEIAKGKPSGEFLTWEDLAKMKYTWRVALETLRMVPPVFAGFRTVLKDIEFGGYLIPEGWKIFWATNMTHMDNSIFPEPTKFDPTRFENQASIPPYCFIPFGGGPRICPGIEFARIETLVTVHHLVTRFKWKLCHTDNFFGRNPTPAPTGGLPIEITSMNLM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0570 474 PANTHER CYTOCHROME P450 26 27 456 - -
Vvi19g0570 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
Vvi19g0570 474 SUPERFAMILY Cytochrome P450 21 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 Gene3D Cytochrome P450 20 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Vvi19g0570 474 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 CDD CYP90-like 60 469 - -
Vvi19g0570 474 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0570 474 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0570 Vvi-Chr19 6307747 6309528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0570 29 442 Cytochrome P450 AT3G13730 33.014 8.40e-75 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0570 - - vvi:100262336 944.495