Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0556 ATGGAGACGGTTCGTAGAAGAATGATGATGACCTCTGGCGAAGCTGTCAAACACAAGAGCTTCTTTGACGCCTTTGCTCAAGTCCTGAAGAATGAGGGTATCAAGTCTCTCTTCAAGGGTGCTGATGCTAACATTCTTTGTGCAGTTGCTGATGCAGGCGTGCTTGCTGGTTATGACAAGTTGCAGGAGATGTGA 195 0.4718 METVRRRMMMTSGEAVKHKSFFDAFAQVLKNEGIKSLFKGADANILCAVADAGVLAGYDKLQEM* 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0556 64 SUPERFAMILY Mitochondrial carrier 2 60 IPR023395 -
Vvi19g0556 64 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 63 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi19g0556 64 Gene3D Mitochondrial carrier domain 1 64 IPR023395 -
Vvi19g0556 64 Pfam Mitochondrial carrier protein 1 63 IPR018108 -
Vvi19g0556 64 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 64 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0556 Vvi-Chr19 6213932 6214126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0556 1 62 Antiporters AT3G08580 80.645 3.58e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0556 K05863 - csin:114308230 103.99