Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0547 ATGATCTGCTCGATAAAGCAATCCGTGTCCTCTTTGCAAGCCCTCACTCGTTCAGACTTTTACCAGCGGAAGTCTCCGGTAAAGTCGTTGTCTCTCCCCTCCGTTGTTGGCGGTACCTCGCCTGTGAAGCCTCTCCATCTAGCTCCGGTTCGGGGTTTGGGTTTTGGGTTGATCGAGGATTTGAGGGTTCGGAGGCCCTTGATCAGATGCGAGGCTTACGAGGCTGACCGGTCGGAGCCGGTCGAGAGCGACGTCGTAAAGGGGCGATCAGAGGCGGCGAAGAAGGTGAAGATCGGGTTGTATTTCGCGACGTGGTGGGCTCTGAACGTTGTGTTCAATATTTATAACAAGAAAGTTCTCAATGCGTTTCCGTACCCTTGGCTGACGTCGACGTTGTCGCTTGCGACCGGATCGCTTATGATGCTGATCTCCTGGGCTACTAGGATCGCTGAAACTCCTAAGACTGATTTTGCGTTTTGGAAGACCCTTTTTCCTGTTGCTGTGGCTCATACAATTGGGCATGTGGCTGCAACAGTGAGTATGTCCAAGGTTGCGGTGTCTTTTACTCACATAATCAAGAGTGGTGAGCCTGCATTCAGTGTCTTAGTTTCAAGGTTCCTATTGGGTGAGAGTTTTCCAACTTCGGTGTACTTCTCGCTCATTCCAATCATCGGAGGTTGTGCTCTGGCCGCCGTCACCGAGCTGAACTTCAACATGATTGGTTTTATGGGAGCCATGATTTCGAACCTGGCTTTTGTTTTTCGCAACATATTTTCAAAGAGAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCTATAATGTCACTGTTAATTCTCACCCCGTTCGCAATTGCTGTCGAGGGACCACAGATGTGGGCTGCTGGATGGCAAAATGCCGTTTCTCAAATTGGACCCCATTTCGTATGGTGGGTGGCGGCCCAGAGTGTATTCTATCACCTCTACAATCAGGTGTCATACATGTCGCTGGATGAGATCTCTCCCTTGACGTTTAGCATTGGAAACACCATGAAGCGTATATCTGTCATAGTCTCCTCAATCATCATCTTCCACACACCCGTCCAGCCCATCAATGCTCTTGGAGCTGCCATCGCAATCCTTGGAACTTTCTTGTATTCTCAGGCAAAGCAGTGA 1170 0.494 MICSIKQSVSSLQALTRSDFYQRKSPVKSLSLPSVVGGTSPVKPLHLAPVRGLGFGLIEDLRVRRPLIRCEAYEADRSEPVESDVVKGRSEAAKKVKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLATGSLMMLISWATRIAETPKTDFAFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPTSVYFSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSIMSLLILTPFAIAVEGPQMWAAGWQNAVSQIGPHFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0547 389 Pfam Triose-phosphate Transporter family 97 385 IPR004853 -
Vvi19g0547 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 232 - -
Vvi19g0547 389 PANTHER SOLUTE CARRIER FAMILY 35 97 388 - -
Vvi19g0547 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 386 - -
Vvi19g0547 389 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 97 388 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0547 Vvi-Chr19 6153315 6156621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0547 1 388 Antiporters AT5G54800 76.884 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0547 K15283 - vvi:100258996 730.709