Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0541 ATGCAGTCTGCAGAAGATCCAGATAGGACTATTAAGACCCTTCTTCAAGAGAGCTTCACAACTTCTGATAGCTCTTATGTAACATTTACCCCTGTTGAAGCTTCTTCCTTCAGTATGACCTTAAATGGAGGAGACCCGGACAATGTGCCTGTCATGCCCTCAGGGTTTTCTATCTCGCCTGATGGGCCAACTGGAGATGAAGGAAGTCTGGTGACGATAGTGTTTCAAATCTTGGATGGTACAGCATCGCCTATGCATTTCCCTTCACATTCAGTGGGTACCATGTATAAGCTCATCACAGAGACTGCCAAATCTATCACAGCTGGGACTGTTGATCCAGATAACATGGGCAGATGA 357 0.4566 MQSAEDPDRTIKTLLQESFTTSDSSYVTFTPVEASSFSMTLNGGDPDNVPVMPSGFSISPDGPTGDEGSLVTIVFQILDGTASPMHFPSHSVGTMYKLITETAKSITAGTVDPDNMGR* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0541 118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 13 108 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0541 Vvi-Chr19 6093124 6093480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0541 14 108 Homeobox Transcription Factor Family AT1G05230 43.564 8.90e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0541 K09338 - vvi:104877581 132.109