Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0533 ATGAAAACAAAAACATGCATGAAGATACCATGGAATATTGTACTATTCTCTTGTGTATTACTCTTCTATATTTCTCCTAAGGTTCAAGTCTGTCGAGGACAAGACGAAGATATCGACGCGCCACCACCTCTGCCACTGGAAGAAGAAGAATGCAACGGAATATTCCTGTCCTACACTTTCATATCGCGACAGAAGGCATTCCCACGACTGAAGAATGCATCAGCGCAGGCTTGGGCTTTTAAGTCCACCGCCACGGTGATGAATACAGGGTTAGATGAGTTGAAGGCATGGAAGATATTTATAGGGTTTCAGCATGAGGAGATATTGGTGAGTGCAGATGGGGCTGTTATAGCAGATGGGGATGATTTTCCGGCGGCGGTCGGGAACGGGACCTACTTGTCGGGGTATCCGCAGGCGGATTTAAAGACCTCTGTTGAGACTGCAAGTGATTTGAATCAGATGCAGGTGCAGATTCCGATGACTGGGACGCAGTTCGGGTTGAAGCCTCCGGCAGTTCCTATGCCAAGGACTATAAGGCTTGAAAATGATGGATATAAATGCCCTAATCCTACTCGTCGTGGGAGCTCAATGCATGTATGCTGTGCAAAGGATCCAAAATACAAGGCCAGAGAGGAAAAATCAACGAAGTTCTCGCCTCGACGGAACGGTGATCTCTCCTTCTCTTACGATGTCCTCCAAGCCTCGGACAGCAACTATCTTGCCCAAGTAACCATTGATAACAAAAACCCTATTGGCCGTCTGGACCATTGGAACTTAACTTGGGAGTGGATGAGAGGAGAGTTCATATACAACATGAGAGGAGCCTTCACTCGTAAAAAGGACAGCTCAGAATGCATATACGGGGAAGCCGGACAGTACTACAAAACCTTTGATTTCTCTGCTGTCATGAACTGCGAGAAAAGACCAGTCATTGTAGACCTGCCTGCTGATAGAGCAAAGGATGAGAAAGTTGGGAACTTACCATATTGCTGTAGAAATGGCAGTCTTCTACCGAGCACCATGGACGTGAGCAGATCAAGATCCGTTTTCCAATTACAAGTTTACAAGCTTCCACCTGACCTGAATCGAACCGCTCTTTTCCCACCCCAGAACTGGGAAGTTGACGGCGTTCTTAATCCACATTACAAGTGTGGCCCTCCTATTAGAGTAGACCCAACAGAATTTCCAGAACCGAGCGGCCTTCAGTCTACCGTTATAGCCGTGGCAAGTTGGCAAGTGGTCTGCAACATCACTCGCCCTCGAGCCAAGCATTCCAGATGTTGCGTTTCCTTTTCCGCCTTCTACAATGATTCCGTTGTGCCCTGCAACACCTGCGCTTGCGGCTGTGAGGAATCAGACACTTGCAGTGCCGACGCCAACCCTTTGCTCCTCCCTTCGGAGGCTCTGCTTGTGCCCTTTGACAATAGAACAGCCAGAGCAAAAGCTTGGGCTAAAGTTAAACACTATCCTGTTCCAGATCCATTGCCTTGTCCGGACAATTGTAGGGTTAGCATTAATTGGCACATCTATACTGATTACAGGACTGGATGGACCGCCCGGATTTCAATCTTCAATTGGGATGATGTGATTTTTGAGGACTGGTTTGGAGCAATTGTGATGGAGAAAACTTATCCTGGTTATGAAAATGTGTACTCATTCAATGGGACCAAGCTGCCACAGCTCAACAATACCATCTTCTTTGAAGGCTTACCAGGTCTGAACTACTTAATGGGAGAGACAAATGGGACTAACCCGAAACGTGATCCAAGAGTACCTGGAAAGCAGCAGTCAATAATTTCATTTACCAAGAAACAGACGCCGGGGATCAATTTAGCTAGAGGGGATGGATTTCCTTCACGGGTGTTCTTCAATGGGGAAGAATGCTCTCTTCCTGCACAGCTTCCCTTGAGAGGAGGGCAAAGTCGAACTCATGTCAGCTTCTTGCCAGTGGTTTTCCTCACAGTGGTAATTTGGGGTCTCCATTGA 1986 0.4728 MKTKTCMKIPWNIVLFSCVLLFYISPKVQVCRGQDEDIDAPPPLPLEEEECNGIFLSYTFISRQKAFPRLKNASAQAWAFKSTATVMNTGLDELKAWKIFIGFQHEEILVSADGAVIADGDDFPAAVGNGTYLSGYPQADLKTSVETASDLNQMQVQIPMTGTQFGLKPPAVPMPRTIRLENDGYKCPNPTRRGSSMHVCCAKDPKYKAREEKSTKFSPRRNGDLSFSYDVLQASDSNYLAQVTIDNKNPIGRLDHWNLTWEWMRGEFIYNMRGAFTRKKDSSECIYGEAGQYYKTFDFSAVMNCEKRPVIVDLPADRAKDEKVGNLPYCCRNGSLLPSTMDVSRSRSVFQLQVYKLPPDLNRTALFPPQNWEVDGVLNPHYKCGPPIRVDPTEFPEPSGLQSTVIAVASWQVVCNITRPRAKHSRCCVSFSAFYNDSVVPCNTCACGCEESDTCSADANPLLLPSEALLVPFDNRTARAKAWAKVKHYPVPDPLPCPDNCRVSINWHIYTDYRTGWTARISIFNWDDVIFEDWFGAIVMEKTYPGYENVYSFNGTKLPQLNNTIFFEGLPGLNYLMGETNGTNPKRDPRVPGKQQSIISFTKKQTPGINLARGDGFPSRVFFNGEECSLPAQLPLRGGQSRTHVSFLPVVFLTVVIWGLH* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0533 661 PANTHER COBRA-LIKE PROTEIN 7 13 656 - -
Vvi19g0533 661 Pfam COBRA-like protein 239 418 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0533 Vvi-Chr19 5992654 5994851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0533 1 660 COBRA Gene Family AT3G20580 60.358 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0533 - - vvi:100243454 1372.45