Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0527 ATGGAAATTAATTGGTTGGAAATTTCCTTTTCGGGAAGGAAAAGTGAAAAAATTTTATCTTCAAAGAGTCAAGGTTCGATCAATTTCCAACAGCCAAGTTTCATGTCTGAACTCGACATCCAGATCCCCACTGCTTTTGATCCGTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCTGGGTCAAAAGATTATGTGCATATCCGCATACAGCAACGGAACGGAAGGAAAAGCCTGACAACTGTCCAGGGTCTGCGAAAAGAATTTAGTTACAACAAGATCCTCAAGGACCTCAAGAAGGAATTCTGCTGCAATGGTACTGTTGTTCAAGACCCGGAACTAGGCCAGGTTATTCAACTTCAAGGTGATCAGCGAAAGAATGTTTCAACCTTTCTTGTGCAGGCTGGCATTGTGAAGAAGGAGGATATCAAGATTCATGGTTTCTGA 444 0.4279 MEINWLEISFSGRKSEKILSSKSQGSINFQQPSFMSELDIQIPTAFDPFAEANAEDSGAGSKDYVHIRIQQRNGRKSLTTVQGLRKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEDIKIHGF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0527 147 FunFam Eukaryotic translation initiation factor SUI1 36 147 - -
Vvi19g0527 147 NCBIfam translation initiation factor SUI1 39 147 IPR005874 GO:0003743
Vvi19g0527 147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 39 147 - -
Vvi19g0527 147 SUPERFAMILY eIF1-like 32 147 IPR036877 GO:0003743|GO:0006413
Vvi19g0527 147 ProSiteProfiles Translation initiation factor SUI1 family profile. 65 135 IPR001950 GO:0003743|GO:0006413
Vvi19g0527 147 Gene3D - 25 147 - -
Vvi19g0527 147 Pfam Translation initiation factor SUI1 62 136 IPR001950 GO:0003743|GO:0006413
Vvi19g0527 147 CDD eIF1_SUI1 63 146 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0527 Vvi-Chr19 5929703 5931402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0527 35 147 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 1.81e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0527 K03113 - vvi:100245122 228.024