Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0499 ATGGAATGTGTGATTGCATGCCTGAGTTCAGCAGTATCATCGTTTTCTGAACATCTTTGTGGCTTGATCTGCTCCAAAGTTGGGAATCCCTTCACCTTCAAGTCTAATTATAGTCATCTGCAACAGGAGCTGCAACGTCTAAACGATCTGAAATCCACAGTGGAAAGGGACCACGATGAATCGGTTCCAGGAGTAAATGACTGGTGGAGAAATGTTGAAGAAACTGGCTGTAAAGTGAGACCGATGCAAGCAAAGATAGAAGCCAACAAAGAGAGGTGTTGTGGTGGCTTCAAAAATCTCTTTCTGCAAAGCAGGGAAGTGGCAGAGGCACTGAAGGAGGTGCGAGGACTTGAGGTACGTGGAAATTGCCTTGCCAATTTGCTGGCTGCCAATCGTGAAGCAACAGCAGTGGAGCATATGCCTGTGGAATCAATTGTTCATCAACCCGCAGCATCCAAAAATTTAGCCACAATTATGAATCTGCTGAATGACGATACAGTTAGAATAATTGGGGTTTGGGGTCTGGGAGGAATAGGCAAAACTACTCCAGTTAAGAATTTGAACAACATGCTTAAGGATGCCTCTTCAACTACTCCACCTTTTAGCATTGTCATATGGATCACCCTGTCCAGGGAGTGGGACCACAAAAGCATCCAGGCACAAATTGCTCGGAGATTGAATATGAAGGTGAATACCGAAGACAGCACTGAGAGTCTGGCTGCCAGATTGTGTGAAAGACTGAAGAGGGAAGAAAAGTTTCTCCTCCTTCTAGATGATGTTTGGAAGGAAATTGATTTGGATGATTTGGGTATTCCCCGACCTGAAGACCACGTGGCTTGTAAAATCATATTGACAACCAGATTTTTAAATGTTTGCCGAGGGATGAAAACAGACAGAGAGATTCCCATTCATGTCCTAAACGATGATGAAGCTTGGAAATTGTTCTGTAAAAATGCAGGGGAGGCAGCCATTTTAGAAGACGTTGAACCAGTTGCGAGGGCAATAACTAAGGAGTGTGGAGGATTGCCCTTGGCAATAAATATGATGGGAACATCCATGAGAAAGAAGACTAGCAAACACCAGTGGGAGCATGCATTGAAGGAGCTGCAAAGGTCAGTGCCGCATAACATCTACGGGGTAGAGGATAGGGTTTACAAGCCTTTAAAGTGGAGTTATGATTCCTTGCAAGGTAACATCCAATCTTGCTTTTTGTATTGCTCTTTATATCCTGAGGATTTCTCAATTAAAATAAGTGAACTTGTACAATGCTGGCTGGGGGAAGGCCTTTTAGATGTAGATGAACAACAAAGCTATGAGGATATCTACAATAGTGGAGTTGCTTTAGTTGAAAATCTCAAGGATTGTTGTTTGCTGGAAAATGATGATGATGACAAAAGCGGCACTGTGAAGATGCATGATCTAGTTCGTGATGTCGCGATTTGGATTGCATCCTCCTCAGAGGATGAATGTAAATCTCTTGTTCAATCCGGAACTGGATCGAGCAAATTCCCAGTGTCCAGATTGACACCATCTTTGAAGAGAATTTCTTTCATGCGTAATGCATTAACATGGCTGCCAGATAGTCGGATACCTTGCTCGGAGGCCTCCACTTTGATTTTACAAAATAATAACAAACTTAAGATAGTTCCTGAGGCATTCCTGCTCGGATTTCAAGCACTCAGGGTCTTGAATCTAAGTAATACCAACATCCAGCGATTGCCTCTTTCCCTCATCCACCTTGGTGAACTTCGTGCCCTTTTATTAAGCCAATGTGGTAGGCTCAATGAATTACCCCCTGTGGGGCGGCTTAGTAAACTACAAGTGCTGGATTGCAGTAATAGTGGTATCCTGAAATTGCCAGAAGGGATGGAGCAGTTGAGCAACTTACGGGAATTAAACTTGTCAGGCACTTGGGGGTTGAAAACCTACGGAGCTGGATTGGTATCAAGGCTGTCTGGTTTAGAGATTCTGGACATGAGTGAGAGTAACTGTAGATGGTGTCTGAAGACAGAGACAAACGAGGGAAACGCAGCACTACTTGAGGAGCTAGGATGTCTGGAGCGATTAATTGTTTTAAAGATGGACTTGAATGGCACCACACATCCCTTGTTGGAATATGCTCCTTGGATGGAAAGGTTGAAAAGCTTCAGAATTAGGGTATCTCGATTTTATCACGAAAGTCTTCTTGTGAGGTACGCTGCTACTCGGTTCATTTTGAGAAAGAGTGAAGAAATTCTATTCAAGAATGATTTCAAGAATAAAGATGGAAAATTTGAGGAAAGAAAGCTTTTACTTTCGGGATTGGATCTGTCAGGCAAATGGAATGAATGGTTGTTGTTAACACGTGCAGCCGTTCTTGAACTGGAATGGTGCACGGGGTTAAATAATCTGTTTGATAGTGTTGGTGGCTTTGTTTATCTCAAGTCACTTTCTATTACGGATTCCAACGTCAGGTTTAAGCCAACAGGAGGATGTCGTTCCCCAAATGACCTACTTCCAAATCTAGAGGAACTTCACCTCATTACTCTCGATAGCCTAGAGAGCATATCAGAATTAGTTGGGAGTCTTGGACTCAAATTCTCAAGGCTAAAAGGAATGAGGGTGGCCGGTTGTCCGAAACTAAAATATCTTCTCTCTTGTGATGATTTTACTCAACCCTTGGAAAAGCTGGAACTAATTTGTTTAAATGCCTGTGACGATTTGAGTGCTATGTTCATTTACAGTTCAGGGCAGACCTCAATGCCATATCCCGTTGCTCCAAACTTGCAGAAAATAGCGTTATCATTGCTTCCCAACTTGAAGACTTTAAGCAGACAAGAAGAAACATGGCAACATCTAGAGCATATTTATGTGAGAGAGTGTAGAAATCTGAAGAAGCTACCTTTGAATGAGCAAAGTGCAAATACTTTGAAAGAGATAAGAGGAGAGGAGGAGTGGTGGAAGCAATTGGAGTGGGATGATGATGTTACCAGCTCCACTCTCCAGCCACTTTTCAAAGTTCCAGCTTTCTGA 3012 0.4286 MECVIACLSSAVSSFSEHLCGLICSKVGNPFTFKSNYSHLQQELQRLNDLKSTVERDHDESVPGVNDWWRNVEETGCKVRPMQAKIEANKERCCGGFKNLFLQSREVAEALKEVRGLEVRGNCLANLLAANREATAVEHMPVESIVHQPAASKNLATIMNLLNDDTVRIIGVWGLGGIGKTTPVKNLNNMLKDASSTTPPFSIVIWITLSREWDHKSIQAQIARRLNMKVNTEDSTESLAARLCERLKREEKFLLLLDDVWKEIDLDDLGIPRPEDHVACKIILTTRFLNVCRGMKTDREIPIHVLNDDEAWKLFCKNAGEAAILEDVEPVARAITKECGGLPLAINMMGTSMRKKTSKHQWEHALKELQRSVPHNIYGVEDRVYKPLKWSYDSLQGNIQSCFLYCSLYPEDFSIKISELVQCWLGEGLLDVDEQQSYEDIYNSGVALVENLKDCCLLENDDDDKSGTVKMHDLVRDVAIWIASSSEDECKSLVQSGTGSSKFPVSRLTPSLKRISFMRNALTWLPDSRIPCSEASTLILQNNNKLKIVPEAFLLGFQALRVLNLSNTNIQRLPLSLIHLGELRALLLSQCGRLNELPPVGRLSKLQVLDCSNSGILKLPEGMEQLSNLRELNLSGTWGLKTYGAGLVSRLSGLEILDMSESNCRWCLKTETNEGNAALLEELGCLERLIVLKMDLNGTTHPLLEYAPWMERLKSFRIRVSRFYHESLLVRYAATRFILRKSEEILFKNDFKNKDGKFEERKLLLSGLDLSGKWNEWLLLTRAAVLELEWCTGLNNLFDSVGGFVYLKSLSITDSNVRFKPTGGCRSPNDLLPNLEELHLITLDSLESISELVGSLGLKFSRLKGMRVAGCPKLKYLLSCDDFTQPLEKLELICLNACDDLSAMFIYSSGQTSMPYPVAPNLQKIALSLLPNLKTLSRQEETWQHLEHIYVRECRNLKKLPLNEQSANTLKEIRGEEEWWKQLEWDDDVTSSTLQPLFKVPAF* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0499 1003 SUPERFAMILY L domain-like 470 969 - -
Vvi19g0499 1003 Gene3D - 130 301 IPR027417 -
Vvi19g0499 1003 PRINTS Disease resistance protein signature 339 353 - -
Vvi19g0499 1003 PRINTS Disease resistance protein signature 169 184 - -
Vvi19g0499 1003 PRINTS Disease resistance protein signature 601 617 - -
Vvi19g0499 1003 PRINTS Disease resistance protein signature 247 261 - -
Vvi19g0499 1003 Gene3D Ribonuclease Inhibitor 484 753 IPR032675 -
Vvi19g0499 1003 Pfam Leucine rich repeat 536 591 IPR001611 GO:0005515
Vvi19g0499 1003 Gene3D - 392 480 IPR036388 -
Vvi19g0499 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 406 IPR027417 -
Vvi19g0499 1003 Coils Coil 37 60 - -
Vvi19g0499 1003 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 961 - -
Vvi19g0499 1003 Pfam NB-ARC domain 160 393 IPR002182 GO:0043531
Vvi19g0499 1003 FunFam Probable disease resistance protein At5g66910 305 391 - -
Vvi19g0499 1003 Gene3D - 305 391 IPR042197 -
Vvi19g0499 1003 FunFam Probable disease resistance protein At1g63360 392 481 - -
Vvi19g0499 1003 FunFam Probable disease resistance protein At1g61300 129 300 - -
Vvi19g0499 1003 Gene3D Ribonuclease Inhibitor 761 909 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0499 Vvi-Chr19 5477937 5480948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0499 167 491 WRKY Transcription Factor Family AT5G45050 23.442 2.26e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0499 K13459 - vvi:100260669 1985.69