Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0497 ATGGAATTGATGACTTCTGTTTTGGGTTCAGTGGTAGCTGAAATTTCTCGATTTTTTTGTGGCTTTATCTGGTCGGAAACTAAGAATTCCGTCAGATTCAAATCAAACTTCAATGACTTGGAAAAGAAGTTAGAGCTTTTAAAAGATGTTCGATACAAGATGGAGAATGAACTTGATGATTCAGTTTCAATGCCCAAAGTAACTGGGTGGCTTACAGAGGTTGAAGGGATCCAGGATGAAGTGAATTCTGTTCTACAAAGTATAGCAGCCAACAACAAGAAGCGTTGTGGTGGTTTCTTTAGTTGCTGTCAATGGAGCAGGGAACTCGCTAAAACACTCGAGAAGGTACAGATGCTTCAGAAAGAGGGCAATTCCATCATTTCTATGGCTGCTGCCAACCGAAAAGCCCATGCAGTGGAGCACATGCCTGGACCATCAGTCGAAAATCAGTCGACAGCATCACAAAATCTAGCCAGAATCATGGATCTGCTGAATGATGATGGAGTCAAGAGTATTGGTGTCTGGGGTATGGGGGGTGTGGGCAAAACTACCCTGGTAAAGAACTTGAACAACAAGCTCGAGAATGCTTCTTCTGCACAACCTTTTGGGGTTGTCATATGGGTCACTGTGTCCAAGGATTTGGACTTGAGAAGGATCCAAATGCAAATAGCTCACAGATTGAATGTGGAAGTGAAAATGGAAGAAAGCACAGAGAGTTTGGCTGTTAAATTGTTCAGGAGACTGAAGAGGACAGGCAAGTTTCTTCTCATTCTGGATGATGTTTGGAAGGGAATTGATTTGGACGCTTTGGGTGTCCCAAGGCCTGAAGTTCATACGGGTTGTAAGATCATAATAACAACTCGGTTTTTAGATGTTTGCAGGCAGATGAAGATAGATAAAAGAGTAAAAGTGCAGATCTTGAATTATGATGAGGCCTGGGAATTGTTTTGTCAAAATGCAGGTGAGGTAGCCACCTTAAAGCCTATAAAACCGTTAGCGGAGACCGTTACGAAAAAATGTGACGGATTGCCTTTGGCCATAATCATCATGGCCACATCTATGAGGGGGAAGAAGAAGGTTGAGCTTTGGAAGGATGCTTTGAATGAGCTACAAAATTCACAGCCAGAAAATATCCCGGGGATCGAGGATCAGGTTTATAGAGTCCTAAAGTGGAGTTACGATTCATTGCAGGGTAAGAACATGAAATCTTGCTTCCTATTTTGCTCCCTGTTTCCTGAGGATTTTTCGATTGATATAAGTGAACTGACGAAATACTGGCTAGCGGAAGGCTTAATAGATGAACACCAAACCTATGACAATATCCACAACAGAGGATTTGCGGTAGCTGAATATCTCAAGGACTGCTGTTTGTTGGAAGATGGTGACCCCAAAGAAACCACCGTGAAGATGCATGATGTGGTTCGTGATGTTGCGATATGGATTGCGTCTTCGTTGGAGCATGGATGCAAATCCCTAGTGCGCTCAGGAATCAGATTGCGTAAGGTATCAGAGTCTGAAATGTTGAAGCTTGTAAAGAGAATTTCTTACATGAATAATGAAATTGAAAGGCTGCCTGATTGTCCAATATCTTGCTCAGAGGCAACTACTTTACTTCTACAAGGTAATTCCCCCCTTGAGAGAGTTCCTGAGGGCTTCCTACTAGGCTTTCCAGCACTAAGGGTACTCAATCTGGGTGAAACCAAGATCCAAAGATTGCCTCATTCCCTTCTCCAGCAGGGTGAACTCCGCGCTCTTATACTAAGGCAGTGCAGTTCCCTTGAAGAATTACCTTCACTGGGAGGGCTTAGAAGACTACAAGTGCTTGATTGCAGTTGTACTGACCTCAAGGAATTACCAGAAGGGATGGAGCAGCTGAGCTGCTTAAGGGTTTTGAATCTATCATACACAAAGCAGTTGCAAACCTTTGCAGCCAGACTAGTGTCTGGGTTGTCTGGTCTGGAGGTTCTAGAAATGATAGGTAGCAACTACAAGTGGGGTGTGAGGCAAAAGATGAAAGAGGGAGAAGCAACATTTAAGGACCTAGGGTGCCTGGAGCAACTAATTCGCTTAAGCATCGAATTGGAAAGCATCATATACCCCTCCTCAGAGAATATTAGCTGGTTCGGAAGATTGAAAAGCTTCGAATTTTCTGTGGGCTCATTGACTCATGGTGGGGAAGGCACAAACCTTGAGGAAAGGTTGGTCATTATTGATAATCTTGATCTCTCAGGAGAATGGATTGGGTGGATGTTATCTGATGCAATTTCTCTATGGTTTCATCAATGCAGCGGACTAAATAAGATGCTTGAAAACTTAGCGACAAGGAGCTCTGGTTGCTTTGCTAGTTTGAAGTCTCTTTCAATTATGTTTTCCCACTCCATGTTTATACTAACAGGAGGATCATATGGTGGCCAATATGATCTACTGCCAAATCTAGAAAAACTTCATCTCTCCAATCTCTTTAATCTTGAGAGCATTTCAGAATTAGGTGTTCATCTTGGACTCAGATTCTCAAGACTGAGGCAATTGGAAGTGTTGGGTTGTCCCAAAATAAAATACCTTCTGTCTTATGATGGTGTCGATCTATTCTTGGAAAACCTAGAAGAAATCAAGGTAGAATACTGCGACAATTTGAGGGGTCTATTTATACACAATTCTAGGAGGGCATCATCGATGCCCACTACTCTGGGTTCTGTTGTTCCAAACTTGAGGAAAGTACAGTTGGGATGTCTTCCTCAATTGACGACTCTAAGCAGAGAAGAAGAGACATGGCCACATCTAGAGCATCTGATAGTGAGAGAGTGCGGAAATTTGAATAAGCTCCCTCTGAATGTCCAAAGTGCAAACAGCATAAAAGAAATAAGAGGAGAACTGATATGGTGGGACACATTAGAGTGGGACAACCACGAAACCTGGTCTACTCTCCGGCCTTTTGTCCGGGCCATGGCCTCTCATCCAGGCCAACTGTGA 2970 0.4313 MELMTSVLGSVVAEISRFFCGFIWSETKNSVRFKSNFNDLEKKLELLKDVRYKMENELDDSVSMPKVTGWLTEVEGIQDEVNSVLQSIAANNKKRCGGFFSCCQWSRELAKTLEKVQMLQKEGNSIISMAAANRKAHAVEHMPGPSVENQSTASQNLARIMDLLNDDGVKSIGVWGMGGVGKTTLVKNLNNKLENASSAQPFGVVIWVTVSKDLDLRRIQMQIAHRLNVEVKMEESTESLAVKLFRRLKRTGKFLLILDDVWKGIDLDALGVPRPEVHTGCKIIITTRFLDVCRQMKIDKRVKVQILNYDEAWELFCQNAGEVATLKPIKPLAETVTKKCDGLPLAIIIMATSMRGKKKVELWKDALNELQNSQPENIPGIEDQVYRVLKWSYDSLQGKNMKSCFLFCSLFPEDFSIDISELTKYWLAEGLIDEHQTYDNIHNRGFAVAEYLKDCCLLEDGDPKETTVKMHDVVRDVAIWIASSLEHGCKSLVRSGIRLRKVSESEMLKLVKRISYMNNEIERLPDCPISCSEATTLLLQGNSPLERVPEGFLLGFPALRVLNLGETKIQRLPHSLLQQGELRALILRQCSSLEELPSLGGLRRLQVLDCSCTDLKELPEGMEQLSCLRVLNLSYTKQLQTFAARLVSGLSGLEVLEMIGSNYKWGVRQKMKEGEATFKDLGCLEQLIRLSIELESIIYPSSENISWFGRLKSFEFSVGSLTHGGEGTNLEERLVIIDNLDLSGEWIGWMLSDAISLWFHQCSGLNKMLENLATRSSGCFASLKSLSIMFSHSMFILTGGSYGGQYDLLPNLEKLHLSNLFNLESISELGVHLGLRFSRLRQLEVLGCPKIKYLLSYDGVDLFLENLEEIKVEYCDNLRGLFIHNSRRASSMPTTLGSVVPNLRKVQLGCLPQLTTLSREEETWPHLEHLIVRECGNLNKLPLNVQSANSIKEIRGELIWWDTLEWDNHETWSTLRPFVRAMASHPGQL* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0497 989 SMART AAA_5 168 308 IPR003593 GO:0016887
Vvi19g0497 989 FunFam Probable disease resistance protein At1g63360 393 480 - -
Vvi19g0497 989 Coils Coil 37 57 - -
Vvi19g0497 989 Pfam NB-ARC domain 157 394 IPR002182 GO:0043531
Vvi19g0497 989 SUPERFAMILY L domain-like 463 952 - -
Vvi19g0497 989 Gene3D Ribonuclease Inhibitor 478 747 IPR032675 -
Vvi19g0497 989 Gene3D - 306 392 IPR042197 -
Vvi19g0497 989 Gene3D Ribonuclease Inhibitor 775 963 IPR032675 -
Vvi19g0497 989 FunFam Probable disease resistance protein At1g61300 133 301 - -
Vvi19g0497 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 408 IPR027417 -
Vvi19g0497 989 Gene3D - 128 303 IPR027417 -
Vvi19g0497 989 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 941 - -
Vvi19g0497 989 PRINTS Disease resistance protein signature 623 639 - -
Vvi19g0497 989 PRINTS Disease resistance protein signature 248 262 - -
Vvi19g0497 989 PRINTS Disease resistance protein signature 171 186 - -
Vvi19g0497 989 PRINTS Disease resistance protein signature 340 354 - -
Vvi19g0497 989 Gene3D - 393 477 IPR036388 -
Vvi19g0497 989 FunFam Probable disease resistance protein At5g66910 306 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0497 Vvi-Chr19 5439371 5442340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0497 169 657 WRKY Transcription Factor Family AT5G45050 24.084 1.85e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0497 K13459 - vvi:100257323 1956.8