Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0483 ATGGATCCCTCTGCAGCTGCAATAGAACGGGAGCTACTGCCGAGACTCCAAGAAGATTCACCTCCAAGAAACCCCTCCATCCGATATCGTCACTATGCCCATCCTCGAGAATGTGCAAGAACTGTGCCTACTTCAGCCAGAGCTCGGAGAAGAAAGAAACCTAACTCTGCGGAAGCCCTAAAGGCCAGGAAAGAGAAGTCGAAAAGGAAGAGGGAGAAAAACAAGGAAGCAATTTCACTTCTGAGTGGCATTCTCTATTACTTCAAAAAGATGGGCCGATACCCTTTTGAAAATATGGTTACCATGAACCATTTCGTCTGCAATTTGCCTTACATTCATGGTAACCCAACCGAGGTGCGTAGCAAAATCGAGAAGCTGAGAAAGAAGTACAAGAAGCTTTGGAAGAAACATGGCGATAACCTCATGATTATGGACCCCCTCGGTCACGAAGCATTCCAACTGTGGAAGGAAATATGGGGGAAAAAACCAACCGATGATCAGCAGCAGCCGCAGCAGCAGCCAAACATGGATCTGTCTGAGCAGACAAACAACTATCTGTCCATGTATCCTTTCTTGAAGGAATCAATGCAGTCTGATCCGAGCAATCTTTCTTTGAAAGTTTTACCTGAAGCCATTGTGAATGAGGGTCTGGGACGATTGAAGAGCTCCGAAATGGAGCAGTTTGATGGCGAATGGAGGGAACTACAGATGAAGGAAATAGAGCTGTATTTGATGCGGATCTCTACAATCAAGAACCAAACTCAGCGTTTACTGGATATCGTTACCAACTATCAACCTCAGGGTGATGATGAGTCTTTGGATGACCAGGATCTAGATGAGGTGTAA 846 0.4563 MDPSAAAIERELLPRLQEDSPPRNPSIRYRHYAHPRECARTVPTSARARRRKKPNSAEALKARKEKSKRKREKNKEAISLLSGILYYFKKMGRYPFENMVTMNHFVCNLPYIHGNPTEVRSKIEKLRKKYKKLWKKHGDNLMIMDPLGHEAFQLWKEIWGKKPTDDQQQPQQQPNMDLSEQTNNYLSMYPFLKESMQSDPSNLSLKVLPEAIVNEGLGRLKSSEMEQFDGEWRELQMKEIELYLMRISTIKNQTQRLLDIVTNYQPQGDDESLDDQDLDEV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0483 281 MobiDBLite consensus disorder prediction 1 74 - -
Vvi19g0483 281 MobiDBLite consensus disorder prediction 51 74 - -
Vvi19g0483 281 PANTHER BNAANNG10740D PROTEIN-RELATED 34 258 IPR007592 GO:0006355
Vvi19g0483 281 Pfam Protein of unknown function, DUF573 75 160 IPR007592 GO:0006355
Vvi19g0483 281 Coils Coil 57 77 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vvi19g0483 DUF573 5.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0483 - K25680 vvi:104877576 503.442