Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0465 ATGTATTATCCTGTGGTATGCACCCTCTTAGAAGGTATAAGGTCTCTGAAAGGAAGAAATAGAATGCAGTTATATTGTTGTAGTTATCCTCTTAGTACTCAGATATATTGCACTTTTTGTCTTTTGCCTTGTTGGACTCTTGGCTTCCTTGGACTCACATTTTGCAAAGTTATTGTCATATTCTGTGAGGTTGTTGCTATATATGGAGTTATTGTGGCAATCATTCTTCAAACAAAGCTAGAGAGTGTGCCTGCATCCAATATTTATGCACCAGAGTCCCTTAGAGTCAGATATGCAATCTTTGCCTCTGGAATTATTATGGGTTTTGCCAACCTTGTCTATGGGTCGTCGGTTCAGATGATCTTTCTATATGTCGGTTCATGCAGAAGGAGATGGACCACAACAATCAATGAGCAACTGGAAGGGAGTTTTTAG 435 0.3931 MYYPVVCTLLEGIRSLKGRNRMQLYCCSYPLSTQIYCTFCLLPCWTLGFLGLTFCKVIVIFCEVVAIYGVIVAIILQTKLESVPASNIYAPESLRVRYAIFASGIIMGFANLVYGSSVQMIFLYVGSCRRRWTTTINEQLEGSF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0465 144 Gene3D - 50 129 IPR035921 -
Vvi19g0465 144 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 57 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0465 Vvi-Chr19 5167089 5169708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0465 59 116 Primary Pumps ATPases(2) AT4G32530 82.759 1.56e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0465 K03661 - vvi:100253217 100.908